RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 LPAR6P43657 344 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 P2RY1P47900 373 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 PPP5CP53041 499 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 GNG2P59768 71 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 ERVK-16P61578 105 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 TRAM1Q15629 374 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 MZT2AQ6P582 158 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 TMEM56Q96MV1 263 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 C1QTNF4Q9BXJ3 329 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 TMEM231Q9H6L2 316 aa6.61□□□□□ -1.35
CHD4-212ENST00000545083 IGHV3OR16-12A0A075B7B8 117 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 SMIM30A4D0T7 59 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 H3BMM0 161 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 ZNF701M0R085 212 aaPredicted RBP6.6□□□□□ -1.35
CHD4-212ENST00000545083 SNAPC5O75971 98 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 FCER2P06734 321 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 NPPCP23582 126 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 PSMA1P25786 263 aaKnown RBP6.6□□□□□ -1.35
CHD4-212ENST00000545083 GNRHRP30968 328 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 FGF9P31371 208 aaPredicted RBP6.6□□□□□ -1.35
CHD4-212ENST00000545083 FXYD7P58549 80 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 ARPC4P59998 168 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 DEFB1P60022 68 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 DHRS2Q13268 280 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 TMEM17Q86X19 198 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 CROCCP3Q8IVE0 287 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 ZNF114Q8NC26 417 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 BEST4Q8NFU0 473 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 FCAMRQ8WWV6 532 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 MOB3AQ96BX8 217 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 ATG101Q9BSB4 218 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 MRPL36Q9P0J6 103 aaKnown RBP6.6□□□□□ -1.35
CHD4-212ENST00000545083 PRNDQ9UKY0 176 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 RFNGQ9Y644 331 aa6.6□□□□□ -1.35
CHD4-212ENST00000545083 HMCN2Q8NDA2 5059 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 A0A087WXM4 84 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 TRAV1-2A0A0B4J238 106 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 A0A1W2PS18 150 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 HELTA6NFD8 242 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 PDCD5O14737 125 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 TMEM50AO95807 157 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 RLN1P04808 185 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 F2RP25116 425 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 NPBWR1P48145 328 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 NUTF2P61970 127 aaKnown RBP6.59□□□□□ -1.35
CHD4-212ENST00000545083 MLLT11Q13015 90 aaPredicted RBP6.59□□□□□ -1.35
CHD4-212ENST00000545083 OXA1LQ15070 435 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 KCTD21Q4G0X4 260 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 Q5VSD8 79 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 CADM3Q8N126 398 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 TSPAN14Q8NG11 270 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 METTL26Q96S19 204 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 ACOT13Q9NPJ3 140 aa6.59□□□□□ -1.35
CHD4-212ENST00000545083 TEX48A0A1B0GUV7 120 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 CCDC160A6NGH7 325 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 SMIM9A6NGZ8 99 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 FAM90A26D6RGX4 464 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 PGLYRP1O75594 196 aaPredicted RBP6.58□□□□□ -1.36
CHD4-212ENST00000545083 IGKV3-20P01619 116 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 RAB3BP20337 219 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 XGP55808 180 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 SPINK9Q5DT21 86 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 GDF5OSQ5U4N7 250 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 TPRA1Q86W33 373 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 HOGA1Q86XE5 327 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 LYPD1Q8N2G4 141 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 C15orf53Q8NAA6 179 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 GLMPQ8WWB7 406 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 CNBD2Q96M20 576 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 FKBP11Q9NYL4 201 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 YTHDF2Q9Y5A9 579 aaKnown RBP6.58□□□□□ -1.36
CHD4-212ENST00000545083 U3KQE9 123 aa6.58□□□□□ -1.36
CHD4-212ENST00000545083 SMIM18P0DKX4 95 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 HLA-DRB4P13762 266 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
CHD4-212ENST00000545083 PRCDQ00LT1 54 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 MLANAQ16655 118 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 ZNF709Q8N972 641 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 C18orf15Q96N68 181 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 MGLLQ99685 303 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 FNDC4Q9H6D8 234 aaPredicted RBP6.57□□□□□ -1.36
CHD4-212ENST00000545083 RSL24D1Q9UHA3 163 aaKnown RBP6.57□□□□□ -1.36
CHD4-212ENST00000545083 LINC00588Q9Y4M8 146 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 HLA-DRB4X5D2U9 266 aa6.57□□□□□ -1.36
CHD4-212ENST00000545083 LOC102723971A0A1B0GUV8 181 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 NOL3O60936 208 aaKnown RBP6.56□□□□□ -1.36
CHD4-212ENST00000545083 IGKV1-39P01597 117 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 IGKV1-17P01599 117 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 IGKV1D-39P04432 117 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 ALDH3B2P48448 385 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 DAD1P61803 113 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 ODF1Q14990 250 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 CFAP161Q6P656 301 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 C16orf54Q6UWD8 224 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 C1orf158Q8N1D5 194 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 LGALS14Q8TCE9 139 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 SEC22AQ96IW7 307 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 CCDC90BQ9GZT6 254 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 RBM38Q9H0Z9 239 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms