RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 OR1P1Q8NH06 330 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 GPR146Q96CH1 333 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 IGHV3-35A0A0C4DH35 117 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 F8W735 103 aaPredicted RBP11.17□□□□□ -0.62
LRRK1-211ENST00000538064 UPK1BO75841 260 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 SCAF4O95104 1147 aaKnown RBP11.17□□□□□ -0.62
LRRK1-211ENST00000538064 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 ZFAND6Q6FIF0 208 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 OR52E5Q8NH55 327 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 SCARB1Q8WTV0 552 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
LRRK1-211ENST00000538064 PRR13Q9NZ81 148 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 CACNG5Q9UF02 275 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 FLVCR2Q9UPI3 526 aa11.17□□□□□ -0.62
LRRK1-211ENST00000538064 IGHV3-21A0A0B4J1V1 117 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 FAM240BA0A1B0GVZ2 78 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 NDUFA4O00483 81 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 SULT1A3P0DMM9 295 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 SULT1A4P0DMN0 295 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 HOXA1P49639 335 aaPredicted RBP11.16□□□□□ -0.62
LRRK1-211ENST00000538064 SPCS3P61009 180 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 C4orf46Q504U0 113 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 Q6ZRM9 215 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 RBPMS2Q6ZRY4 209 aaKnown RBP11.16□□□□□ -0.62
LRRK1-211ENST00000538064 LYZL2Q7Z4W2 148 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 COQ8AQ8NI60 647 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 FAM110AQ9BQ89 295 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 CHRDL1Q9BU40 450 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 C20orf85Q9H1P6 137 aa11.16□□□□□ -0.62
LRRK1-211ENST00000538064 TENM2Q9NT68 2774 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 TCRBP04435 133 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 OR4E1P0C645 316 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 ADMP35318 185 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 SNCAP37840 140 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.62
LRRK1-211ENST00000538064 ASAH1Q13510 395 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 SMCO1Q147U7 214 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 AARDQ4LEZ3 155 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 Q56UQ5 140 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 SPAG8Q99932 426 aaPredicted RBP11.15□□□□□ -0.62
LRRK1-211ENST00000538064 GGTLC1Q9BX51 225 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 GAR1Q9NY12 217 aaKnown RBP11.15□□□□□ -0.62
LRRK1-211ENST00000538064 TMED3Q9Y3Q3 217 aa11.15□□□□□ -0.62
LRRK1-211ENST00000538064 A0A1B0GU03 582 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 ANXA7P20073 488 aaKnown RBP11.14□□□□□ -0.63
LRRK1-211ENST00000538064 FCGR2BP31994 310 aaPredicted RBP11.14□□□□□ -0.63
LRRK1-211ENST00000538064 DEFA1P59665 94 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 DEFA3P59666 94 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 SPINK9Q5DT21 86 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 NMSQ5H8A3 153 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 UBAC2Q8NBM4 344 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 ENKURQ8TC29 256 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 TBC1D24Q9ULP9 559 aa11.14□□□□□ -0.63
LRRK1-211ENST00000538064 ALMS1Q8TCU4 4167 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 LCE6AA0A183 80 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 CEBPZOSA8MTT3 80 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 I3L2K1 104 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 K7EMT4 169 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 TSPAN4O14817 238 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 SLC25A6P12236 298 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
LRRK1-211ENST00000538064 DHRS2Q13268 280 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 OR1S1Q8NH92 325 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 MISP3Q96FF7 219 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 ZNF414Q96IQ9 312 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 C20orf24Q9BUV8 137 aa11.13□□□□□ -0.63
LRRK1-211ENST00000538064 TRAV6A0A075B6T7 132 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 LOC102724200A0A096LPH7 203 aaPredicted RBP11.12□□□□□ -0.63
LRRK1-211ENST00000538064 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 CORTO00230 105 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 NUPL2O15504 423 aaKnown RBP11.12□□□□□ -0.63
LRRK1-211ENST00000538064 IFNA21P01568 189 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 CTSGP08311 255 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 HOXB5P09067 269 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 H2AFB2P0C5Z0 115 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 MFAP4P55083 255 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 LAMTOR1Q6IAA8 161 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 TXN2Q99757 166 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
LRRK1-211ENST00000538064 NUDT15Q9NV35 164 aa11.12□□□□□ -0.63
LRRK1-211ENST00000538064 PLECQ15149 4684 aaKnown RBP11.11□□□□□ -0.63
LRRK1-211ENST00000538064 HYDINQ4G0P3 5121 aa11.11□□□□□ -0.63
LRRK1-211ENST00000538064 MT-CO2P00403 227 aa11.11□□□□□ -0.63
LRRK1-211ENST00000538064 HTR2BP41595 481 aa11.11□□□□□ -0.63
LRRK1-211ENST00000538064 TNFRSF9Q07011 255 aa11.11□□□□□ -0.63
LRRK1-211ENST00000538064 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
LRRK1-211ENST00000538064 IL17DQ8TAD2 202 aa11.11□□□□□ -0.63
LRRK1-211ENST00000538064 IGHV3OR16-8A0A075B7F1 116 aa11.1□□□□□ -0.63
LRRK1-211ENST00000538064 ZNF207O43670 478 aaKnown RBP11.1□□□□□ -0.63
LRRK1-211ENST00000538064 IFITM3Q01628 133 aa11.1□□□□□ -0.63
LRRK1-211ENST00000538064 ODF3L2Q3SX64 289 aa11.1□□□□□ -0.63
LRRK1-211ENST00000538064 GGNBP1Q5YKI7 109 aa11.1□□□□□ -0.63
LRRK1-211ENST00000538064 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms