RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 OR13F1Q8NGS4 319 aa8.13□□□□□ -1.11
AMBRA1-207ENST00000529553 SLC5A7Q9GZV3 580 aa8.13□□□□□ -1.11
AMBRA1-207ENST00000529553 ATG5Q9H1Y0 275 aa8.13□□□□□ -1.11
AMBRA1-207ENST00000529553 Q9H3A6 140 aa8.13□□□□□ -1.11
AMBRA1-207ENST00000529553 NSG2Q9Y328 171 aa8.13□□□□□ -1.11
AMBRA1-207ENST00000529553 YTHDF2Q9Y5A9 579 aaKnown RBP8.13□□□□□ -1.11
AMBRA1-207ENST00000529553 U3KQE9 123 aa8.13□□□□□ -1.11
AMBRA1-207ENST00000529553 IGHV3OR16-12A0A075B7B8 117 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 LOC102723971A0A1B0GUV8 181 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 IFITM5A6NNB3 132 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 KRASP01116 189 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 HBE1P02100 147 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 NKX2-1P43699 371 aaPredicted RBP8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 USF2Q15853 346 aaPredicted RBP8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 AADACL3Q5VUY0 350 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 ZNF818PQ6ZRF7 136 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 DHRSXQ8N5I4 330 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 BPIFB6Q8NFQ5 453 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 OR51H1Q8NH63 302 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 PINX1Q96BK5 328 aaKnown RBP8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 ZNF503Q96F45 646 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 GOLT1BQ9Y3E0 138 aa8.12□□□□□ -1.11
AMBRA1-207ENST00000529553 TRAV1-2A0A0B4J238 106 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 RPS10-NUDT3A0A1W2PQS6 291 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 FAM90A26D6RGX4 464 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 SCGB2A1O75556 95 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 SCGNO76038 276 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 NUDT3O95989 172 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 ERHP84090 104 aaKnown RBP8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 C16orf54Q6UWD8 224 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 NUDCD2Q8WVJ2 157 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 TMEM230Q96A57 120 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 C17orf77Q96MU5 243 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 ACOT13Q9NPJ3 140 aa8.11□□□□□ -1.11
AMBRA1-207ENST00000529553 DBX1A6NMT0 343 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 EREGO14944 169 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 SSX5O60225 188 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 G6PCP35575 357 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 LPAR6P43657 344 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 PPP5CP53041 499 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 GNG2P59768 71 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 RPS25P62851 125 aaKnown RBP8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 PRCDQ00LT1 54 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 SSX7Q7RTT5 188 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 C8orf59Q8N0T1 100 aaPredicted RBP8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 SYT8Q8NBV8 401 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 GLMPQ8WWB7 406 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 NRN1Q9NPD7 142 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 DAPK2Q9UIK4 370 aa8.1□□□□□ -1.11
AMBRA1-207ENST00000529553 KRTAP29-1A8MX34 341 aaPredicted RBP8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 CLN5O75503 358 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 PGLYRP1O75594 196 aaPredicted RBP8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 HSPE1P61604 102 aaKnown RBP8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 CLINT1Q14677 625 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 SPATA31B1PQ5VZV4 182 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 IZUMO2Q6UXV1 221 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 C1orf158Q8N1D5 194 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 BEST4Q8NFU0 473 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 TSPAN14Q8NG11 270 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 LGALS14Q8TCE9 139 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 FCAMRQ8WWV6 532 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 KRTAP1-5Q9BYS1 174 aa8.09□□□□□ -1.11
AMBRA1-207ENST00000529553 TRAV30A0A087WSZ9 112 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 TMEM235A6NFC5 223 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 INS-IGF2F8WCM5 200 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 CORTO00230 105 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 IFNA5P01569 189 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 FXYD4P59646 89 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 FABP5Q01469 135 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 FOXI2Q6ZQN5 318 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 Q6ZSN1 163 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 HOGA1Q86XE5 327 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 ZNF709Q8N972 641 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 OR4X1Q8NH49 305 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 OR4A16Q8NH70 328 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 C7orf50Q9BRJ6 194 aaKnown RBP8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 UPK3BQ9BT76 320 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 VCXQ9H320 206 aa8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 SAV1Q9H4B6 383 aaPredicted RBP8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 FAM212BQ9NTI7 297 aaPredicted RBP8.08□□□□□ -1.12
AMBRA1-207ENST00000529553 F5H768 121 aa8.07□□□□□ -1.12
AMBRA1-207ENST00000529553 SMR3BP02814 79 aaPredicted RBP8.07□□□□□ -1.12
AMBRA1-207ENST00000529553 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.124e-6■■■■□ 19.8
AMBRA1-207ENST00000529553 SNCAP37840 140 aa8.07□□□□□ -1.12
AMBRA1-207ENST00000529553 SUB1P53999 127 aaKnown RBP eCLIP8.07□□□□□ -1.12
AMBRA1-207ENST00000529553 OR10A3P58181 314 aa8.07□□□□□ -1.12
AMBRA1-207ENST00000529553 ICAM4Q14773 271 aa8.07□□□□□ -1.12
AMBRA1-207ENST00000529553 VCX3BQ9H321 246 aa8.07□□□□□ -1.12
AMBRA1-207ENST00000529553 CBY3A6NI87 242 aa8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 PTGES3LE9PB15 166 aa8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 IGKV1-17P01599 117 aa8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 ATP5G1P05496 136 aa8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 PTHLHP12272 177 aa8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 RAB3BP20337 219 aa8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 RPL5P46777 297 aaKnown RBP8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 ATP5G3P48201 142 aa8.06□□□□□ -1.12
AMBRA1-207ENST00000529553 FXYD7P58549 80 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms