RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SCGB2A1O75556 95 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 ATG12O94817 140 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 MT-CO2P00403 227 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 IFNA4P05014 189 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 HLA-DMAP28067 261 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 SNCAP37840 140 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 UCP3P55916 312 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 HSPE1P61604 102 aaKnown RBP5.29□□□□□ -1.56
USP46-208ENST00000512656 PRCDQ00LT1 54 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 PHLDA2Q53GA4 152 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 TBC1D26Q86UD7 250 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 APRG1Q8IVJ8 170 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 ZNF114Q8NC26 417 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 PHLDA1Q8WV24 401 aaPredicted RBP5.29□□□□□ -1.56
USP46-208ENST00000512656 SEC22AQ96IW7 307 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 OR10C1Q96KK4 312 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 RNF2Q99496 336 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 RARRES2Q99969 163 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 NXF2Q9GZY0 626 aaKnown RBP5.29□□□□□ -1.56
USP46-208ENST00000512656 TMEM231Q9H6L2 316 aa5.29□□□□□ -1.56
USP46-208ENST00000512656 A0A087WXM4 84 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 A0A1W2PS18 150 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 DFFBO76075 338 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 APOA1P02647 267 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 GYPEP15421 78 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 RCVRNP35243 200 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 TFPI2P48307 235 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 SUB1P53999 127 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP46-208ENST00000512656 EWSR1Q01844 656 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP46-208ENST00000512656 LGALS9CQ6DKI2 356 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 ZNF600Q6ZNG1 722 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 TCF24Q7RTU0 167 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 LYSMD2Q8IV50 215 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 SLC35G3Q8N808 338 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 DUSP18Q8NEJ0 188 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 GPX8Q8TED1 209 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 PINX1Q96BK5 328 aaKnown RBP5.28□□□□□ -1.56
USP46-208ENST00000512656 ZNF486Q96H40 463 aaPredicted RBP5.28□□□□□ -1.56
USP46-208ENST00000512656 PDCD10Q9BUL8 212 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 C11orf68Q9H3H3 251 aaKnown RBP5.28□□□□□ -1.56
USP46-208ENST00000512656 COMMD3Q9UBI1 195 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 FRAS1Q86XX4 4008 aa5.28□□□□□ -1.56
USP46-208ENST00000512656 IGKV3-7A0A075B6H7 116 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 TRAV2A0A0B4J234 112 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 CORTO00230 105 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 ST8SIA3O43173 380 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 IFNA17P01571 189 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 PGAM2P15259 253 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 AKR1C2P52895 323 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 TCTAP57738 103 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 LSM3P62310 102 aaKnown RBP5.27□□□□□ -1.57
USP46-208ENST00000512656 TMEM187Q14656 261 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 RBMS2Q15434 407 aaKnown RBP5.27□□□□□ -1.57
USP46-208ENST00000512656 FAM90A2PQ658T7 463 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 TOMM20LQ6UXN7 152 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 SNX29P2Q8IUI4 249 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 CENPSQ8N2Z9 138 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 GBGT1Q8N5D6 347 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 OR11H2Q8NH07 326 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 C11orf45Q8TAV5 145 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 MRGPRFQ96AM1 343 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 YIPF6Q96EC8 236 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 NARS2Q96I59 477 aaKnown RBP5.27□□□□□ -1.57
USP46-208ENST00000512656 VSIRQ9H7M9 311 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 ENY2Q9NPA8 101 aa5.27□□□□□ -1.57
USP46-208ENST00000512656 KMT2AQ03164 3969 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 IGHV3OR16-13A0A075B7E8 117 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 IGHV3-74A0A0B4J1X5 117 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 INS-IGF2F8WCM5 200 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 B3GALNT1O75752 331 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 TNFAIP8O95379 198 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 CA1P00915 261 aaPredicted RBP5.26□□□□□ -1.57
USP46-208ENST00000512656 IGKV1-39P01597 117 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 IGHV3-48P01763 117 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 IGKV1D-39P04432 117 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 TBPP20226 339 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 NPPCP23582 126 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 TGFBR1P36897 503 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 HOXA1P49639 335 aaPredicted RBP5.26□□□□□ -1.57
USP46-208ENST00000512656 EIF2B2P49770 351 aaKnown RBP5.26□□□□□ -1.57
USP46-208ENST00000512656 DEFB131AP59861 70 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 RND3P61587 244 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 TMEM41BQ5BJD5 291 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 RNASE10Q5GAN6 216 aaKnown RBP5.26□□□□□ -1.57
USP46-208ENST00000512656 MZT2AQ6P582 158 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 STHQ8IWL8 128 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 ARRDC1Q8N5I2 433 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 CCDC71LQ8N9Z2 235 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 ZFAND1Q8TCF1 268 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 C2CD4CQ8TF44 421 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 C15orf40Q8WUR7 153 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 AP3S1Q92572 193 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 RRNAD1Q96FB5 475 aaKnown RBP5.26□□□□□ -1.57
USP46-208ENST00000512656 METTL26Q96S19 204 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 MLST8Q9BVC4 326 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 MS4A6AQ9H2W1 248 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 FBXL17Q9UF56 701 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 RABAC1Q9UI14 185 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 PUS1Q9Y606 427 aaKnown RBP eCLIP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms