RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 IFI27L2Q9H2X8 130 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 NUFIP1Q9UHK0 495 aaKnown RBP7.77□□□□□ -1.17
USP53-207ENST00000510852 R4GMQ9 66 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 C16orf97H3BN30 126 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 NMBP08949 121 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 ATF1P18846 271 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 CRYGSP22914 178 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 UBA52P62987 128 aaKnown RBP7.77□□□□□ -1.17
USP53-207ENST00000510852 CX3CL1P78423 397 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 CDK5R1Q15078 307 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 KRTAP27-1Q3LI81 207 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 P2RY8Q86VZ1 359 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 ZNF584Q8IVC4 421 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 RAB2BQ8WUD1 216 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 SPTSSAQ969W0 71 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 GINS4Q9BRT9 223 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 SERTAD4Q9NUC0 356 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 CHD6Q8TD26 2715 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 ZNF462Q96JM2 2506 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 ADGRG4Q8IZF6 3080 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 LGALS1P09382 135 aaKnown RBP7.76□□□□□ -1.17
USP53-207ENST00000510852 OR5AC1P0C628 307 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 NHLRC4P0CG21 123 aaPredicted RBP7.76□□□□□ -1.17
USP53-207ENST00000510852 SRPXP78539 464 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 MOB1BQ7L9L4 216 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 STPG4Q8N801 248 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 ACY3Q96HD9 319 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 C4orf45Q96LM5 186 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 C9orf85Q96MD7 179 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 NDUFB11Q9NX14 153 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 SLC25A15Q9Y619 301 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 M0R135 149 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 MPPED1O15442 326 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 SCTP09683 121 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 SUB1P53999 127 aaKnown RBP eCLIP7.76□□□□□ -1.17
USP53-207ENST00000510852 FBXL19-AS1Q494R0 122 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 WDR38Q5JTN6 314 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 RPS4Y2Q8TD47 263 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 PHYHIPLQ96FC7 376 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 ZNF799Q96GE5 643 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 JPT2Q9H910 190 aa7.76□□□□□ -1.17
USP53-207ENST00000510852 HIVEP3Q5T1R4 2406 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 TRBV5-7A0A0A0MS05 114 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 C5orf49A4QMS7 147 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 RBFOX3A6NFN3 312 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 OR4C45A6NMZ5 311 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 H7BYZ3 331 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 IGKV3-15P01624 115 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 P01737 135 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 HGFACQ04756 655 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 MLANAQ16655 118 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 VAX1Q5SQQ9 334 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 Q5XG85 94 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 Q75L30 129 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 MUCL1Q96DR8 90 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 PBOV1Q9GZY1 135 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 ZNF586Q9NXT0 402 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 INSIG2Q9Y5U4 225 aa7.75□□□□□ -1.17
USP53-207ENST00000510852 TMEM212A6NML5 194 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 LYRM9A8MSI8 78 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.74□□□□□ -1.17
USP53-207ENST00000510852 J3QR89 54 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 CXorf1O96002 111 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 GADD45AP24522 165 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 RBM11P57052 281 aaKnown RBP7.74□□□□□ -1.17
USP53-207ENST00000510852 DHRS2Q13268 280 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 FAM57BQ71RH2 274 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 OR5AK2Q8NH90 309 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 ITLN2Q8WWU7 325 aaPredicted RBP7.74□□□□□ -1.17
USP53-207ENST00000510852 RNASE6Q93091 150 aaKnown RBP7.74□□□□□ -1.17
USP53-207ENST00000510852 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 TMEM133Q9H2Q1 129 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 CA10Q9NS85 328 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 FAM208BQ5VWN6 2430 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 DIDO1Q9BTC0 2240 aaKnown RBP7.74□□□□□ -1.17
USP53-207ENST00000510852 C5orf63A6NC05 138 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 PGLYRP1O75594 196 aaPredicted RBP7.74□□□□□ -1.17
USP53-207ENST00000510852 IGLV1-44P01699 117 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 PGA5P0DJD9 388 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 TGFBR1P36897 503 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 KIR2DS2P43631 304 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 ZNF83P51522 516 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 RND3P61587 244 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 ARL16Q0P5N6 197 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 C10orf91Q5T1B1 145 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 OR8B12Q8NGG6 310 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 OR51E2Q9H255 320 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 MOB1AQ9H8S9 216 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 RTTNQ86VV8 2226 aa7.74□□□□□ -1.17
USP53-207ENST00000510852 IGHV1-18A0A0C4DH31 117 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 BCL2L11O43521 198 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 CFPP27918 469 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 TFF3Q07654 80 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 INSL4Q14641 139 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 IQCJQ1A5X6 159 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 FAM120AOSQ5T036 256 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 SLC35G3Q8N808 338 aa7.73□□□□□ -1.17
USP53-207ENST00000510852 ZNF431Q8TF32 576 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms