RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 CLDN25C9JDP6 229 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 J3QRK9 145 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 HMGB3O15347 200 aaKnown RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 ZNF737O75373 536 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 ATG12O94817 140 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 IFNA1P01562 189 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 CTSDP07339 412 aaPredicted RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 RPSAP08865 295 aaKnown RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 HTR1AP08908 422 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 METTL15P1P0C7V9 234 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 SMIM17P0DL12 118 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 SPI1P17947 270 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 S100A4P26447 101 aaKnown RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 CASP1P29466 404 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 ATP5G3P48201 142 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 EIF2B2P49770 351 aaKnown RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 PIGPP57054 158 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 DEFA3P59666 94 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 KRTAP12-1P59990 96 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 KRTAP12-3P60328 96 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 NNATQ16517 81 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 ARHGAP11BQ3KRB8 267 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 TMEM155Q4W5P6 130 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 LCN15Q6UWW0 184 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 ZNF826PQ6ZT77 177 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 DEFB128Q7Z7B8 93 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 BPIFA4PQ86YQ2 179 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 HIST3H2BBQ8N257 126 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 OR8B3Q8NGG8 313 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 WFDC5Q8TCV5 224 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 DNAJC9Q8WXX5 260 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 ADAT3Q96EY9 351 aaPredicted RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 HOPXQ9BPY8 73 aaPredicted RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 GINS3Q9BRX5 216 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 C8orf4Q9NR00 106 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 CKLFQ9UBR5 152 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 PRNDQ9UKY0 176 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 AMMECR1Q9Y4X0 333 aaPredicted RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 ZNF106Q9H2Y7 1883 aaKnown RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 ECM29Q5VYK3 1845 aa0.75□□□□□ -2.29
SMN2-208ENST00000508258 NCKAP5O14513 1909 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 ROCK1Q13464 1354 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 TONSLQ96HA7 1378 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 HIVEP2P31629 2446 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 A0A0D9SG52 128 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 ORC5O43913 435 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 TCL1BO95988 128 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 PMP2P02689 132 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 CRYGAP11844 174 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 G0S2P27469 103 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 RNASE4P34096 147 aaKnown RBP0.74□□□□□ -2.29
SMN2-208ENST00000508258 PSMD8P48556 350 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 YPEL3P61236 119 aaPredicted RBP0.74□□□□□ -2.29
SMN2-208ENST00000508258 VBP1P61758 197 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 GNG3P63215 75 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 ZNF345Q14585 488 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 Q1T7F1 81 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 Q6ZQT0 140 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 C7orf65Q6ZTY9 151 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 TRAPPC6BQ86SZ2 158 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 EXOC3-AS1Q8N2X6 119 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 C10orf126Q8N4M7 172 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 NEK7Q8TDX7 302 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 MBD3L1Q8WWY6 194 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 SLAMF6Q96DU3 332 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 SH3BGRL3Q9H299 93 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 MIXL1Q9H2W2 232 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 BOLA2Q9H3K6 86 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 OSTCQ9NRP0 149 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 GID8Q9NWU2 228 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 COL4A5P29400 1685 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 SYNMO15061 1565 aa0.74□□□□□ -2.29
SMN2-208ENST00000508258 ARHGEF28Q8N1W1 1705 aaKnown RBP0.73□□□□□ -2.29
SMN2-208ENST00000508258 MUC19Q7Z5P9 8384 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 CCDC88CQ9P219 2028 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 IGKV1D-42A0A075B6H8 117 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 MEIKINA0A087WXM9 373 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 A0A087X0T9 212 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 TMEM212A6NML5 194 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 C1orf196B1AJZ1 125 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 SDCBPO00560 298 aaPredicted RBP0.73□□□□□ -2.29
SMN2-208ENST00000508258 CYB5BO43169 146 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 MFSD11O43934 449 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 IFNA7P01567 189 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 OR4E1P0C645 316 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 IFI30P13284 250 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 GPX2P18283 190 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 FKBP2P26885 142 aaKnown RBP0.73□□□□□ -2.29
SMN2-208ENST00000508258 CRYBA4P53673 196 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 TAS2R41P59536 307 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 NCALDP61601 193 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 B2MP61769 119 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 RHOBP62745 196 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 RHEBQ15382 184 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 RRN3P1Q2M238 152 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 KHDC3LQ587J8 217 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 LYRM7Q5U5X0 104 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 AAED1Q7RTV5 226 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 COA5Q86WW8 74 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 STX12Q86Y82 276 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms