RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 AP2S1P53680 142 aaPredicted RBP8.16□□□□□ -1.1
CCHCR1-219ENST00000505392 FXYD7P58549 80 aa8.16□□□□□ -1.1
CCHCR1-219ENST00000505392 OXA1LQ15070 435 aa8.16□□□□□ -1.1
CCHCR1-219ENST00000505392 OR4A16Q8NH70 328 aa8.16□□□□□ -1.1
CCHCR1-219ENST00000505392 ZNRF2Q8NHG8 242 aa8.16□□□□□ -1.1
CCHCR1-219ENST00000505392 BORCS5Q969J3 196 aa8.16□□□□□ -1.1
CCHCR1-219ENST00000505392 TPRKBQ9Y3C4 175 aa8.16□□□□□ -1.1
CCHCR1-219ENST00000505392 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 TRAV18A0A075B6X5 111 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 RGS10O43665 173 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 IGKV3-20P01619 116 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 HERV-K104P61576 105 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 HSPE1P61604 102 aaKnown RBP8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 SNRPD3P62318 126 aaKnown RBP8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 PRCDQ00LT1 54 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 MLANAQ16655 118 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 KCTD21Q4G0X4 260 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 GSG1LQ6UXU4 331 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 OR5AP2Q8NGF4 316 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 LGALS14Q8TCE9 139 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 DUSP21Q9H596 190 aa8.15□□□□□ -1.1
CCHCR1-219ENST00000505392 TRDV1A0A1B0GX56 115 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 NOTOA8MTQ0 251 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 SNCAP37840 140 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 DAD1P61803 113 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 OGFRL1Q5TC84 451 aaPredicted RBP8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 C22orf42Q6IC83 251 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 DHRS11Q6UWP2 260 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 CMTM1Q8IZ96 169 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 DAPK2Q9UIK4 370 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 YTHDF2Q9Y5A9 579 aaKnown RBP8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 U3KQE9 123 aa8.14□□□□□ -1.11
CCHCR1-219ENST00000505392 FAM90A26D6RGX4 464 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 CLN5O75503 358 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 HLA-DRB4P13762 266 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 RFX2P48378 723 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 SPINK9Q5DT21 86 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 C16orf54Q6UWD8 224 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 H2BFWTQ7Z2G1 175 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 ZNF2Q9BSG1 426 aaPredicted RBP8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 MRPL36Q9P0J6 103 aaKnown RBP8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 HLA-DRB4X5D2U9 266 aa8.13□□□□□ -1.11
CCHCR1-219ENST00000505392 LOC102723971A0A1B0GUV8 181 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 RPS10-NUDT3A0A1W2PQS6 291 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 MEIS3P1A6NDR6 274 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 NUDT3O95989 172 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 HBE1P02100 147 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 CCL18P55774 89 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 TIGITQ495A1 244 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 GDF5OSQ5U4N7 250 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 PRSS48Q7RTY5 328 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 GLMPQ8WWB7 406 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 SEC22AQ96IW7 307 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 SEPSECSQ9HD40 501 aaKnown RBP8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 RHBDL2Q9NX52 303 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 EHFQ9NZC4 300 aa8.12□□□□□ -1.11
CCHCR1-219ENST00000505392 GPR31O00270 319 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 IGKV1-17P01599 117 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 HNRNPCP07910 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 HOXA1P49639 335 aaPredicted RBP8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 SUB1P53999 127 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 DEFB1P60022 68 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 LYPD1Q8N2G4 141 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 OR4X1Q8NH49 305 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 C7orf50Q9BRJ6 194 aaKnown RBP8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 FNDC4Q9H6D8 234 aaPredicted RBP8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 NRN1Q9NPD7 142 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 RRP15Q9Y3B9 282 aaKnown RBP8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 GOLT1BQ9Y3E0 138 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 LINC00588Q9Y4M8 146 aa8.11□□□□□ -1.11
CCHCR1-219ENST00000505392 TRAV30A0A087WSZ9 112 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 CORTO00230 105 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 SCGB2A1O75556 95 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 IGKV1-39P01597 117 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 PMP2P02689 132 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 IGKV1D-39P04432 117 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 OPRK1P41145 380 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 NKX2-1P43699 371 aaPredicted RBP8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 CBX5P45973 191 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 IZUMO4Q1ZYL8 232 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 PHLDA2Q53GA4 152 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 C1orf158Q8N1D5 194 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 OR4B1Q8NGF8 309 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 OR5H6Q8NGV6 325 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 Q8WTZ3 238 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 LINC00052Q96N35 136 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 AUNIPQ9H7T9 357 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 Q9H8V8 135 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 NDUFB11Q9NX14 153 aa8.1□□□□□ -1.11
CCHCR1-219ENST00000505392 F5H768 121 aa8.09□□□□□ -1.11
CCHCR1-219ENST00000505392 RNASE2P10153 161 aaKnown RBP8.09□□□□□ -1.11
CCHCR1-219ENST00000505392 DLK1P80370 383 aa8.09□□□□□ -1.11
CCHCR1-219ENST00000505392 DHODHQ02127 395 aa8.09□□□□□ -1.11
CCHCR1-219ENST00000505392 Q5VSD8 79 aa8.09□□□□□ -1.11
CCHCR1-219ENST00000505392 SFXN4Q6P4A7 337 aa8.09□□□□□ -1.11
CCHCR1-219ENST00000505392 SIGLEC15Q6ZMC9 328 aa8.09□□□□□ -1.11
CCHCR1-219ENST00000505392 ZNF709Q8N972 641 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms