RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 OGFRL1Q5TC84 451 aaPredicted RBP11.14□□□□□ -0.63
PDLIM7-210ENST00000503827 SCN3BQ9NY72 215 aa11.14□□□□□ -0.63
PDLIM7-210ENST00000503827 RLN1P04808 185 aa11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 GNRHRP30968 328 aa11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 PPP5CP53041 499 aa11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 CCL18P55774 89 aa11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 ERHP84090 104 aaKnown RBP11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 FRZBQ92765 325 aa11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 TMEM230Q96A57 120 aa11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 YTHDF2Q9Y5A9 579 aaKnown RBP11.13□□□□□ -0.63
PDLIM7-210ENST00000503827 HLA-DRB4P13762 266 aa11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 HERV-K104P61576 105 aa11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 Q5VSD8 79 aa11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 LYPD1Q8N2G4 141 aa11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 SEPSECSQ9HD40 501 aaKnown RBP11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 HLA-DRB4X5D2U9 266 aa11.12□□□□□ -0.63
PDLIM7-210ENST00000503827 LOC102723971A0A1B0GUV8 181 aa11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 FAM90A26D6RGX4 464 aa11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 SCGB2A1O75556 95 aa11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 PGLYRP1O75594 196 aaPredicted RBP11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 HBE1P02100 147 aa11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 BTF3P20290 206 aaKnown RBP11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 FXYD7P58549 80 aa11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 DAPK2Q9UIK4 370 aa11.11□□□□□ -0.63
PDLIM7-210ENST00000503827 RPS10-NUDT3A0A1W2PQS6 291 aa11.1□□□□□ -0.63
PDLIM7-210ENST00000503827 NUDT3O95989 172 aa11.1□□□□□ -0.63
PDLIM7-210ENST00000503827 IGKV3-20P01619 116 aa11.1□□□□□ -0.63
PDLIM7-210ENST00000503827 C16orf54Q6UWD8 224 aa11.1□□□□□ -0.63
PDLIM7-210ENST00000503827 LGALS14Q8TCE9 139 aa11.1□□□□□ -0.63
PDLIM7-210ENST00000503827 MGLLQ99685 303 aa11.1□□□□□ -0.63
PDLIM7-210ENST00000503827 GOLT1BQ9Y3E0 138 aa11.1□□□□□ -0.63
PDLIM7-210ENST00000503827 CLN5O75503 358 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 SNCAP37840 140 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 ALDH3B2P48448 385 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 OR5AP2Q8NGF4 316 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 GLMPQ8WWB7 406 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 C7orf50Q9BRJ6 194 aaKnown RBP11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 PTTG2Q9NZH5 202 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 LINC00588Q9Y4M8 146 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 U3KQE9 123 aa11.09□□□□□ -0.63
PDLIM7-210ENST00000503827 CORTO00230 105 aa11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 NKX2-1P43699 371 aaPredicted RBP11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 HSPE1P61604 102 aaKnown RBP11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 RRN3P1Q2M238 152 aa11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 H2BFWTQ7Z2G1 175 aa11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 CMTM1Q8IZ96 169 aa11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
PDLIM7-210ENST00000503827 SMIM30A4D0T7 59 aa11.07□□□□□ -0.64
PDLIM7-210ENST00000503827 FCER2P06734 321 aa11.07□□□□□ -0.64
PDLIM7-210ENST00000503827 HNRNPCP07910 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDLIM7-210ENST00000503827 Q9H8V8 135 aa11.07□□□□□ -0.64
PDLIM7-210ENST00000503827 TPRKBQ9Y3C4 175 aa11.07□□□□□ -0.64
PDLIM7-210ENST00000503827 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 J3QL48 77 aa11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 RGS10O43665 173 aa11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 SUB1P53999 127 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 XGP55808 180 aa11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 CLINT1Q14677 625 aa11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 GDF5OSQ5U4N7 250 aa11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 OR4X1Q8NH49 305 aa11.06□□□□□ -0.64
PDLIM7-210ENST00000503827 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 TRAV18A0A075B6X5 111 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 TRAV30A0A087WSZ9 112 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 NOTOA8MTQ0 251 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 F5H768 121 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 OPRK1P41145 380 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 DLK1P80370 383 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 TIGITQ495A1 244 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 SPINK9Q5DT21 86 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 SSX7Q7RTT5 188 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 C1orf158Q8N1D5 194 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 ZNF709Q8N972 641 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 OR4B1Q8NGF8 309 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 CLUHP3Q96NS8 147 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 ZNF2Q9BSG1 426 aaPredicted RBP11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 SAV1Q9H4B6 383 aaPredicted RBP11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 RHBDL2Q9NX52 303 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 EHFQ9NZC4 300 aa11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 MRPL36Q9P0J6 103 aaKnown RBP11.05□□□□□ -0.64
PDLIM7-210ENST00000503827 TRDV1A0A1B0GX56 115 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 GPR31O00270 319 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 IGKV1-17P01599 117 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 DHRS11Q6UWP2 260 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 Q8WTZ3 238 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 MAGT1Q9H0U3 335 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 SLC35B3Q9H1N7 401 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 DUSP21Q9H596 190 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 FAM212BQ9NTI7 297 aaPredicted RBP11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
PDLIM7-210ENST00000503827 LYRM9A8MSI8 78 aa11.03□□□□□ -0.64
PDLIM7-210ENST00000503827 CBX5P45973 191 aa11.03□□□□□ -0.64
PDLIM7-210ENST00000503827 DEFB1P60022 68 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms