RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MMP26Q9NRE1 261 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 ZNRD1Q9P1U0 126 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 FOXA2Q9Y261 457 aaPredicted RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 TBL2Q9Y4P3 447 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 DOCK11Q5JSL3 2073 aa4.24□□□□□ -1.73
HMGXB4-208ENST00000498325 RYR2Q92736 4967 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 TRAV3A0A0B4J244 114 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 IGHV4-61A0A0C4DH41 118 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 TEX50A0A1B0GTY4 177 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 A0A1W2PN81 502 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 SRRM4A7MD48 611 aaKnown RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 ODF3BA8MYP8 253 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 B4DSR2 109 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 H3BP45 60 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 NUPL2O15504 423 aaKnown RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 GATCO43716 136 aaKnown RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 ACTL6BO94805 426 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 TMEM50AO95807 157 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 IFNA10P01566 189 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 IGKV1-16P04430 117 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 OR8U8P0C7N1 319 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 METTL15P1P0C7V9 234 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 SAA1P0DJI8 122 aaPredicted RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 GATA3P23771 443 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 MAS1LP35410 378 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 CHRNA7P36544 502 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 RAB5CP51148 216 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 SUB1P53999 127 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 RPL8P62917 257 aaKnown RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 ERHP84090 104 aaKnown RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 PRCDQ00LT1 54 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 PAX8Q06710 450 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 TMEM267Q0VDI3 215 aaPredicted RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 PJVKQ0ZLH3 352 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 DIAPH2-AS1Q14236 149 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 CLINT1Q14677 625 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 C19orf54Q5BKX5 351 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 COMMD1Q8N668 190 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 TMEM217Q8N7C4 229 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 C15orf54Q8N8G6 183 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 OR1L8Q8NGR8 309 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 OR5B3Q8NH48 314 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 MALSU1Q96EH3 234 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 ATP5SQ99766 215 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 GINS3Q9BRX5 216 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 HINT2Q9BX68 163 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 PLEKHA3Q9HB20 300 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 WFDC1Q9HC57 220 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 SMCO4Q9NRQ5 59 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 TMEM14BQ9NUH8 114 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 TCF19Q9Y242 345 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 ROS1P08922 2347 aa4.23□□□□□ -1.73
HMGXB4-208ENST00000498325 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 IGHV3-72A0A0B4J1Y9 119 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 A0A1W2PPI3 338 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 A0A1W2PRD5 423 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 A0A1W2PRF3 423 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 A0A1W2PRM7 423 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 C1orf196B1AJZ1 125 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 UMAD1C9J7I0 102 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 FAM157AC9JC47 383 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 C17orf112F2Z3M2 114 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 RNASEK-C17orf49H0YIS7 233 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 TIMM23O14925 209 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 SLC25A17O43808 307 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 MOSP00540 346 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 S100A6P06703 90 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 SNRNP70P08621 437 aaKnown RBP4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 SPP1P10451 314 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 S100PP25815 95 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 BRS3P32247 399 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 SNCAP37840 140 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 RPL35P42766 123 aaKnown RBP4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 VDAC2P45880 294 aaPredicted RBP4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 COMPP49747 757 aaPredicted RBP4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 SULT1A2P50226 295 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 DLX1P56177 255 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 SLC38A11Q08AI6 406 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 KLRD1Q13241 179 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 HES1Q14469 280 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 PEA15Q15121 130 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 PLGLAQ15195 96 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 PSG5Q15238 335 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 LRRC75BQ2VPJ9 315 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 RUSC1-AS1Q66K80 236 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 OR8G2PQ6IF36 304 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 HCP5Q6MZN7 132 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 LINC00469Q8N7U9 141 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 ZNF709Q8N972 641 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 HSD17B11Q8NBQ5 300 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 OR2G3Q8NGZ4 309 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 OR2T10Q8NGZ9 312 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 SFT2D1Q8WV19 159 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 TMED6Q8WW62 240 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 BSCL2Q96G97 398 aaPredicted RBP4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 TMEM147Q9BVK8 224 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 GGACTQ9BVM4 153 aa4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 PARD6GQ9BYG4 376 aaPredicted RBP4.22□□□□□ -1.73
HMGXB4-208ENST00000498325 TUBA4BQ9H853 241 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms