RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 POLEQ07864 2286 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 CTXND1A0A1B0GTU2 59 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 MAP1LC3B2A6NCE7 125 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 H3BQ15 152 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 CYB5BO43169 146 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 YIF1AO95070 293 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 IGLV2-23P01705 113 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 MBP02144 154 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 CRYBA1P05813 215 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 IGHV1-8P0DP01 117 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 BCL2P10415 239 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 PPOXP50336 477 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 ZNF137PP52743 207 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 COTL1Q14019 142 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 RTL8BQ17RB0 113 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-213ENST00000494016 SMUG1Q53HV7 270 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 C11orf71Q6IPW1 123 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 FAM71F2Q6NXP2 309 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 C15orf54Q8N8G6 183 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 CYB561D1Q8N8Q1 229 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 LY6G5BQ8NDX9 201 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 OR9G1Q8NH87 305 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 OSR1Q8TAX0 266 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-213ENST00000494016 RNASE8Q8TDE3 154 aaKnown RBP4.83□□□□□ -1.64
CPSF7-213ENST00000494016 HIST1H2BAQ96A08 127 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 RITA1Q96K30 269 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 Q96MF0 132 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 YPEL4Q96NS1 127 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 MGST2Q99735 147 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 C20orf24Q9BUV8 137 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 ACTR3CQ9C0K3 210 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-213ENST00000494016 MAP1LC3BQ9GZQ8 125 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 BET1LQ9NYM9 111 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 PEMTQ9UBM1 199 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 ZNF257Q9Y2Q1 563 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 LSM4Q9Y4Z0 139 aaKnown RBP4.83□□□□□ -1.64
CPSF7-213ENST00000494016 DMRT1Q9Y5R6 373 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 PUS1Q9Y606 427 aaKnown RBP eCLIP4.83□□□□□ -1.64
CPSF7-213ENST00000494016 CSMD2Q7Z408 3487 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 AKAP9Q99996 3911 aa4.83□□□□□ -1.64
CPSF7-213ENST00000494016 NIPBLQ6KC79 2804 aaeCLIP4.82□□□□□ -1.64
CPSF7-213ENST00000494016 CGB1A6NKQ9 187 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 ZFP92A6NM28 416 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 ZNF727A8MUV8 499 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 SEC14L6B5MCN3 397 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 E7EUB6 86 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 C17orf112F2Z3M2 114 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 INS-IGF2F8WCM5 200 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 K7EQM0 130 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 M0R036 132 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 HMGB3O15347 200 aaKnown RBP4.82□□□□□ -1.64
CPSF7-213ENST00000494016 IGLV1-47P01700 117 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 CRYGBP07316 175 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 LINC00869P0C866 280 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 SAA1P0DJI8 122 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-213ENST00000494016 RNASE2P10153 161 aaKnown RBP4.82□□□□□ -1.64
CPSF7-213ENST00000494016 FOLR2P14207 255 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 GATA3P23771 443 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 PAX6P26367 422 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 OPRK1P41145 380 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 REG1BP48304 166 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 HOXA1P49639 335 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-213ENST00000494016 DLX1P56177 255 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 CD81P60033 236 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 RAB11AP62491 216 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 PRCDQ00LT1 54 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 FOXI1Q12951 378 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 TMEM249Q2WGJ8 235 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 BSXQ3C1V8 233 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 ACOT6Q3I5F7 207 aaPredicted RBP4.82□□□□□ -1.64
CPSF7-213ENST00000494016 RNF212Q495C1 297 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 AKIRIN2Q53H80 203 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 C2orf83Q53S99 150 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 GCSAMLQ5JQS6 135 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 AVPI1Q5T686 147 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 MIC13Q5XKP0 118 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 FAM122CQ6P4D5 195 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 RBMS3Q6XE24 437 aaKnown RBP4.82□□□□□ -1.64
CPSF7-213ENST00000494016 SLC35E3Q7Z769 313 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 ZNF709Q8N972 641 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 C8orf46Q8TAG6 207 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 TMEM167AQ8TBQ9 72 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 GATAD1Q8WUU5 269 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 DPF1Q92782 380 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 RAB39BQ96DA2 213 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 TVP23CQ96ET8 276 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 P2RX4Q99571 388 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 ASCL2Q99929 193 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 PCGF1Q9BSM1 259 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 TMEM133Q9H2Q1 129 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 SDF2L1Q9HCN8 221 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 NPVFQ9HCQ7 196 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 NDUFA4L2Q9NRX3 87 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 CBLN4Q9NTU7 201 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 FKBP11Q9NYL4 201 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 VAX2Q9UIW0 290 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 CBY1Q9Y3M2 126 aa4.82□□□□□ -1.64
CPSF7-213ENST00000494016 APCP25054 2843 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms