RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 RNF167Q9H6Y7 350 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 TMED3Q9Y3Q3 217 aa6.84□□□□□ -1.31
GPNMB-211ENST00000479625 ZNF705FA8MVS1 300 aaPredicted RBP6.83□□□□□ -1.32
GPNMB-211ENST00000479625 KRASP01116 189 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 RLN1P04808 185 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 ZNF705DP0CH99 300 aaPredicted RBP6.83□□□□□ -1.32
GPNMB-211ENST00000479625 ZNF705BP0CI00 300 aaPredicted RBP6.83□□□□□ -1.32
GPNMB-211ENST00000479625 PPP5CP53041 499 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 FXYD7P58549 80 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 ARPC4P59998 168 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 TRAM1Q15629 374 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 ZNF705AQ6ZN79 300 aaPredicted RBP6.83□□□□□ -1.32
GPNMB-211ENST00000479625 FCAMRQ8WWV6 532 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 TMEM56Q96MV1 263 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 ATG101Q9BSB4 218 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 C1QTNF4Q9BXJ3 329 aa6.83□□□□□ -1.32
GPNMB-211ENST00000479625 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-211ENST00000479625 HELTA6NFD8 242 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 IGKV3-20P01619 116 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 PSMA1P25786 263 aaKnown RBP6.82□□□□□ -1.32
GPNMB-211ENST00000479625 FGF9P31371 208 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-211ENST00000479625 DEFB1P60022 68 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 DHRS2Q13268 280 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 ARL6IP1Q15041 203 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 Q5VSD8 79 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 ZNF114Q8NC26 417 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 ZBTB34Q8NCN2 500 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 BEST4Q8NFU0 473 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 MOB3AQ96BX8 217 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 MRPL36Q9P0J6 103 aaKnown RBP6.82□□□□□ -1.32
GPNMB-211ENST00000479625 RFNGQ9Y644 331 aa6.82□□□□□ -1.32
GPNMB-211ENST00000479625 TMEM189A5PLL7 270 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 H3BMM0 161 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 SNAPC5O75971 98 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 NPPCP23582 126 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 F2RP25116 425 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 FUSP35637 526 aaKnown RBP eCLIP6.81□□□□□ -1.32
GPNMB-211ENST00000479625 RANBP1P43487 201 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 LPAR6P43657 344 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 FAM3BP58499 235 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-211ENST00000479625 MLLT11Q13015 90 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-211ENST00000479625 SPINK9Q5DT21 86 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 GDF5OSQ5U4N7 250 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 C18orf15Q96N68 181 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 METTL26Q96S19 204 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 NEU1Q99519 415 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 KRTAP1-5Q9BYS1 174 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
GPNMB-211ENST00000479625 YTHDF2Q9Y5A9 579 aaKnown RBP6.81□□□□□ -1.32
GPNMB-211ENST00000479625 A0A1W2PS18 150 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 ERICH4A6NGS2 130 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 FAM90A26D6RGX4 464 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 PDCD5O14737 125 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 TMEM50AO95807 157 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 RAB3BP20337 219 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 HOXA5P20719 270 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 CRYBB3P26998 211 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 NUTF2P61970 127 aaKnown RBP6.8□□□□□ -1.32
GPNMB-211ENST00000479625 TPRA1Q86W33 373 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 C15orf53Q8NAA6 179 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 PRNDQ9UKY0 176 aa6.8□□□□□ -1.32
GPNMB-211ENST00000479625 TRAV1-2A0A0B4J238 106 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 MEIS3P1A6NDR6 274 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 CASQ2O14958 399 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-211ENST00000479625 HLA-DRB4P13762 266 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 MYL9P24844 172 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 GNRHRP30968 328 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 NPBWR1P48145 328 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 DAD1P61803 113 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 PRCDQ00LT1 54 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 OXA1LQ15070 435 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 PACRGLQ8N7B6 248 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 LGALS14Q8TCE9 139 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 GLMPQ8WWB7 406 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 ACOT13Q9NPJ3 140 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 LINC00588Q9Y4M8 146 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 HLA-DRB4X5D2U9 266 aa6.79□□□□□ -1.32
GPNMB-211ENST00000479625 TEX48A0A1B0GUV7 120 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 RPS10-NUDT3A0A1W2PQS6 291 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 SMIM9A6NGZ8 99 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 PGLYRP1O75594 196 aaPredicted RBP6.78□□□□□ -1.32
GPNMB-211ENST00000479625 NUDT3O95989 172 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 XGP55808 180 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 HERV-K104P61576 105 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 DLK1P80370 383 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 KCTD21Q4G0X4 260 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 GSG1LQ6UXU4 331 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 HOGA1Q86XE5 327 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 C10orf67Q8IYJ2 551 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 ZNF709Q8N972 641 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 TSPAN14Q8NG11 270 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 MGLLQ99685 303 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 CCDC90BQ9GZT6 254 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 FXYD6Q9H0Q3 95 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 SLC35B3Q9H1N7 401 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 FKBP11Q9NYL4 201 aa6.78□□□□□ -1.32
GPNMB-211ENST00000479625 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms