RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 RBMS3Q6XE24 437 aaKnown RBP3.3□□□□□ -1.88
USP25-208ENST00000478932 TMEM144Q7Z5S9 345 aa3.3□□□□□ -1.88
USP25-208ENST00000478932 ZNF843Q8N446 348 aa3.3□□□□□ -1.88
USP25-208ENST00000478932 NPIPB3Q92617 1050 aa3.3□□□□□ -1.88
USP25-208ENST00000478932 RPUSD4Q96CM3 377 aaKnown RBP3.3□□□□□ -1.88
USP25-208ENST00000478932 SMDT1Q9H4I9 107 aa3.3□□□□□ -1.88
USP25-208ENST00000478932 VAX2Q9UIW0 290 aa3.3□□□□□ -1.88
USP25-208ENST00000478932 URGCP-MRPS24S4R325 110 aa3.3□□□□□ -1.88
USP25-208ENST00000478932 M0R1W7 72 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 TOX4O94842 621 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 COL8A1P27658 744 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 CEACAM3P40198 252 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 RPL27AP46776 148 aaKnown RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 PSMB3P49720 205 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 COMPP49747 757 aaPredicted RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 ATP5J2P56134 94 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 PAX2Q02962 417 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 CD69Q07108 199 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 SRSF1Q07955 248 aaKnown RBP eCLIP3.29□□□□□ -1.88
USP25-208ENST00000478932 KLF17Q5JT82 389 aaPredicted RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 FAM90A2PQ658T7 463 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 SPNS3Q6ZMD2 512 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 C1orf122Q6ZSJ8 110 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 MMD2Q8IY49 270 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 FAM24BQ8N5W8 94 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 TEX45Q8NA69 505 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 OR4F5Q8NH21 305 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 MISP3Q96FF7 219 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 PERPQ96FX8 193 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 EAF1Q96JC9 268 aaPredicted RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 UHRF2Q96PU4 802 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 OR4F4Q96R69 305 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 CCL19Q99731 98 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 NIPSNAP3BQ9BS92 247 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 GSX1Q9H4S2 264 aaPredicted RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 DOK5Q9P104 306 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 IGHV3OR16-10A0A075B7F0 116 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 IGHV4-61A0A0C4DH41 118 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 SEC14L6B5MCN3 397 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 CRYGBP07316 175 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 OR10J4P0C629 311 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 NPPCP23582 126 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 TAGLN2P37802 199 aaKnown RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 RPL29P47914 159 aaKnown RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 RND2P52198 227 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 MORN5Q5VZ52 161 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 SLC16A13Q7RTY0 426 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 OR4A5Q8NH83 315 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 SRSF12Q8WXF0 261 aaKnown RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 TMEM37Q8WXS4 190 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 CACNG8Q8WXS5 425 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 CFHR4Q92496 578 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 FAM168AQ92567 244 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 SMIM7Q9BQ49 75 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 SLC25A33Q9BSK2 321 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 DERL1Q9BUN8 251 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 UNKLQ9H9P5 680 aaKnown RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 AURKAIP1Q9NWT8 199 aaPredicted RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 SLC45A2Q9UMX9 530 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 AMMECR1Q9Y4X0 333 aaPredicted RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 DMRT1Q9Y5R6 373 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 OTOGQ6ZRI0 2925 aa3.29□□□□□ -1.88
USP25-208ENST00000478932 FN1P02751 2386 aaKnown RBP3.29□□□□□ -1.88
USP25-208ENST00000478932 PDZD2O15018 2839 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 A0A1W2PN81 502 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 COLCA2A8K830 154 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 ODF3BA8MYP8 253 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 TEX22C9J3V5 150 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 C11orf94C9JXX5 98 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 NDUFB4O95168 129 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 MOSP00540 346 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 CRYBA1P05813 215 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 SAA4P35542 130 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 CHRNA7P36544 502 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 ATP5G3P48201 142 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 SUB1P53999 127 aaKnown RBP eCLIP3.28□□□□□ -1.88
USP25-208ENST00000478932 CX3CL1P78423 397 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 ZNF343Q6P1L6 599 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 MIR17HGQ75NE6 70 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 OR5T1Q8NG75 326 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 SIRPDQ9H106 197 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 SMCO4Q9NRQ5 59 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 S4R3C0 116 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 IGHV4-30-2A0A087WSY4 118 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 TRAV5A0A0B4J249 113 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 IGHV2-70DA0A0C4DH43 119 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 PGPEP1LA6NFU8 196 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 INS-IGF2F8WCM5 200 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 NBR2O15453 112 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 STAG3L2P0CL84 134 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 STAG3L3P0CL85 134 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 HOXB4P17483 251 aaPredicted RBP3.28□□□□□ -1.88
USP25-208ENST00000478932 ORM2P19652 201 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 ATP5IP56385 69 aaPredicted RBP3.28□□□□□ -1.88
USP25-208ENST00000478932 RHOBP62745 196 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 PMS2P11Q13670 270 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 FXYD3Q14802 87 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 OXLD1Q5BKU9 147 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 FAM120AOSQ5T036 256 aa3.28□□□□□ -1.88
USP25-208ENST00000478932 BRD3OSQ6XYD6 125 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms