RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 FXYD6Q9H0Q3 95 aa9.78□□□□□ -0.84
PABPC4-208ENST00000461578 IFT46Q9NQC8 304 aa9.78□□□□□ -0.84
PABPC4-208ENST00000461578 TXNL4BQ9NX01 149 aaKnown RBP9.78□□□□□ -0.84
PABPC4-208ENST00000461578 PMP2P02689 132 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 FXYD7P58549 80 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 PHLDA2Q53GA4 152 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 FAM222AQ5U5X8 452 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 CMTM1Q8IZ96 169 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 SEC22AQ96IW7 307 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 FAM210BQ96KR6 192 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 AUNIPQ9H7T9 357 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.85
PABPC4-208ENST00000461578 HERC1Q15751 4861 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 LRP1BQ9NZR2 4599 aa9.77□□□□□ -0.85
PABPC4-208ENST00000461578 GPR31O00270 319 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 FGF9P31371 208 aaPredicted RBP9.76□□□□□ -0.85
PABPC4-208ENST00000461578 SNCAP37840 140 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 CBX5P45973 191 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 HSPE1P61604 102 aaKnown RBP9.76□□□□□ -0.85
PABPC4-208ENST00000461578 MXD1Q05195 221 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 IZUMO4Q1ZYL8 232 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 TMEM88Q6PEY1 159 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 NIPSNAP3BQ9BS92 247 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 DKK2Q9UBU2 259 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 TMED3Q9Y3Q3 217 aa9.76□□□□□ -0.85
PABPC4-208ENST00000461578 TMEM189A5PLL7 270 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 H3BMM0 161 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 EBAG9O00559 213 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 IGKV1-39P01597 117 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 IGKV3-20P01619 116 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 IGKV1D-39P04432 117 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 CLEC2LP0C7M8 214 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
PABPC4-208ENST00000461578 MLANAQ16655 118 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 TIGITQ495A1 244 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 IDNKQ5T6J7 187 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 DHRS11Q6UWP2 260 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 ZNF705AQ6ZN79 300 aaPredicted RBP9.75□□□□□ -0.85
PABPC4-208ENST00000461578 MRGPRFQ96AM1 343 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 NEU1Q99519 415 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 RNF167Q9H6Y7 350 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 DIABLOQ9NR28 239 aa9.75□□□□□ -0.85
PABPC4-208ENST00000461578 ZNF705FA8MVS1 300 aaPredicted RBP9.74□□□□□ -0.85
PABPC4-208ENST00000461578 FAM90A26D6RGX4 464 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 CLN5O75503 358 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 ZNF705DP0CH99 300 aaPredicted RBP9.74□□□□□ -0.85
PABPC4-208ENST00000461578 ZNF705BP0CI00 300 aaPredicted RBP9.74□□□□□ -0.85
PABPC4-208ENST00000461578 SDC2P34741 201 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 OPRK1P41145 380 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 SNRPD3P62318 126 aaKnown RBP9.74□□□□□ -0.85
PABPC4-208ENST00000461578 KCTD21Q4G0X4 260 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 TBC1D26Q86UD7 250 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 C6orf223Q8N319 242 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 SLC35G3Q8N808 338 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 OR5H2Q8NGV7 314 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 ATG101Q9BSB4 218 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 YTHDF1Q9BYJ9 559 aaKnown RBP9.74□□□□□ -0.85
PABPC4-208ENST00000461578 FNDC4Q9H6D8 234 aaPredicted RBP9.74□□□□□ -0.85
PABPC4-208ENST00000461578 RFNGQ9Y644 331 aa9.74□□□□□ -0.85
PABPC4-208ENST00000461578 SMIM9A6NGZ8 99 aa9.73□□□□□ -0.85
PABPC4-208ENST00000461578 DEFB1P60022 68 aa9.73□□□□□ -0.85
PABPC4-208ENST00000461578 C16orf54Q6UWD8 224 aa9.73□□□□□ -0.85
PABPC4-208ENST00000461578 GLMPQ8WWB7 406 aa9.73□□□□□ -0.85
PABPC4-208ENST00000461578 A0A0A6YYH2 397 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 A6NJ64 397 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 SCGB2A1O75556 95 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 IGKV1-17P01599 117 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 HNRNPCP07910 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
PABPC4-208ENST00000461578 RNASE2P10153 161 aaKnown RBP9.72□□□□□ -0.85
PABPC4-208ENST00000461578 HLA-DRB4P13762 266 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 PSMB9P28065 219 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 GDF5OSQ5U4N7 250 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 OR6F1Q8NGZ6 308 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 OR4X1Q8NH49 305 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 NRG4Q8WWG1 115 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 SSR3Q9UNL2 185 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 U3KQE9 123 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 HLA-DRB4X5D2U9 266 aa9.72□□□□□ -0.85
PABPC4-208ENST00000461578 CORTO00230 105 aa9.71□□□□□ -0.86
PABPC4-208ENST00000461578 S100GP29377 79 aa9.71□□□□□ -0.86
PABPC4-208ENST00000461578 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.86
PABPC4-208ENST00000461578 AP2S1P53680 142 aaPredicted RBP9.71□□□□□ -0.86
PABPC4-208ENST00000461578 SUB1P53999 127 aaKnown RBP eCLIP9.71□□□□□ -0.862e-6■■■□□ 17.2
PABPC4-208ENST00000461578 SCAND1P57086 179 aa9.71□□□□□ -0.86
PABPC4-208ENST00000461578 TAS2R46P59540 309 aa9.71□□□□□ -0.86
PABPC4-208ENST00000461578 DAD1P61803 113 aa9.71□□□□□ -0.86
PABPC4-208ENST00000461578 CNBD2Q96M20 576 aa9.71□□□□□ -0.86
PABPC4-208ENST00000461578 NRN1Q9NPD7 142 aa9.71□□□□□ -0.86
PABPC4-208ENST00000461578 YTHDF2Q9Y5A9 579 aaKnown RBP9.71□□□□□ -0.86
PABPC4-208ENST00000461578 APOBP04114 4563 aaKnown RBP9.71□□□□□ -0.86
PABPC4-208ENST00000461578 LOC102723971A0A1B0GUV8 181 aa9.7□□□□□ -0.86
PABPC4-208ENST00000461578 HLA-DMAP28067 261 aa9.7□□□□□ -0.86
PABPC4-208ENST00000461578 HRH1P35367 487 aa9.7□□□□□ -0.86
PABPC4-208ENST00000461578 ETV6P41212 452 aa9.7□□□□□ -0.86
PABPC4-208ENST00000461578 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
PABPC4-208ENST00000461578 C7orf50Q9BRJ6 194 aaKnown RBP9.7□□□□□ -0.86
PABPC4-208ENST00000461578 FAM212BQ9NTI7 297 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms