RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 THAP8Q8NA92 274 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 WFDC12Q8WWY7 111 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 PERPQ96FX8 193 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 ACY3Q96HD9 319 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 NIPSNAP3BQ9BS92 247 aa8.43□□□□□ -1.06
VIPAS39-203ENST00000448935 LRBAP50851 2863 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 TCRBV4S1A1TA0A5B7 111 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 M0R036 132 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 HMGB3O15347 200 aaKnown RBP8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 REG1AP05451 166 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 CRYGCP07315 174 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 FBP1P09467 338 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 LINC00869P0C866 280 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 PLA2G2AP14555 144 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 AREGP15514 252 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 SAA4P35542 130 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 TAS2R45P59539 299 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 SRSF1Q07955 248 aaKnown RBP eCLIP8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 FXYD3Q14802 87 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 FAM74A3Q4VXF1 159 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 Q8N6K4 173 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 CYB561D1Q8N8Q1 229 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 OR1L4Q8NGR5 311 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 GATAD1Q8WUU5 269 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 PFDN5Q99471 154 aa8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 MRPL32Q9BYC8 188 aaKnown RBP8.42□□□□□ -1.06
VIPAS39-203ENST00000448935 IGKV1OR2-108A0A075B7D4 117 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 NCBP2LA6PVI3 153 aaKnown RBP8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 FCN1O00602 326 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 GATA3P23771 443 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 CEBPGP53567 150 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 BPIFB3P59826 476 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 AWAT1Q58HT5 328 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 GCSAMLQ5JQS6 135 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 SPNS3Q6ZMD2 512 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 TMEM116Q8NCL8 245 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 OR2T6Q8NHC8 308 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 NPIPB3Q92617 1050 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 TVP23CQ96ET8 276 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 FNDC4Q9H6D8 234 aaPredicted RBP8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 SMCO4Q9NRQ5 59 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 FUT9Q9Y231 359 aa8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 PUS1Q9Y606 427 aaKnown RBP eCLIP8.41□□□□□ -1.06
VIPAS39-203ENST00000448935 IGHV4-30-2A0A087WSY4 118 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 CENPVL3A0A0U1RRI6 287 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 B4DEV8 164 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 B4DSR2 109 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 H3BQ15 152 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 PDE6DO43924 150 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 CLN5O75503 358 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 MSMBP08118 114 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 DEFA4P12838 97 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 CTRB1P17538 263 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 RND2P52198 227 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 SSBP2P81877 361 aaPredicted RBP8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 MLANAQ16655 118 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 CLEC12BQ2HXU8 276 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 FAM78BQ5VT40 261 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 PQLC2Q6ZP29 291 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 DYNAPQ8N1N2 210 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 ARPC1AQ92747 370 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 ZNF462Q96JM2 2506 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 TRGV9Q99603 122 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 TMPRSS5Q9H3S3 457 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 TMEM167BQ9NRX6 74 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 TECRQ9NZ01 308 aaKnown RBP8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 ARL2-SNX15V9GYD0 113 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.06
VIPAS39-203ENST00000448935 IGHV1-69DA0A0B4J2H0 117 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 A1L4Q6 167 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 C7orf77A4D0Y5 90 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 FAM74A7A6NL05 159 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 NPIPB5A8MRT5 1133 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 F6UZH7 168 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 TSPAN4O14817 238 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 PAGE4O60829 102 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 IGHV1-69P01742 117 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 FABP1P07148 127 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 OR5G3P0C626 314 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 ARL14EPLP0DKL9 152 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 CD24P25063 80 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 CD81P60033 236 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 FAM90A2PQ658T7 463 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 RASL11BQ9BPW5 248 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 SLC25A33Q9BSK2 321 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 TUBA4BQ9H853 241 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 DNAJC4Q9NNZ3 241 aa8.4□□□□□ -1.07
VIPAS39-203ENST00000448935 ZNF727A8MUV8 499 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 C11orf94C9JXX5 98 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 J3QKU1 62 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 COX7A2P2O60397 106 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 HLA-DRB1P01911 266 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 PAX6P26367 422 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 GCHFRP30047 84 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms