RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 HES5Q5TA89 166 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 STHQ8IWL8 128 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 SPAG16Q8N0X2 631 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 POM121L12Q8N7R1 296 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 GDPD1Q8N9F7 314 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 UBAC2Q8NBM4 344 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 DMBX1Q8NFW5 382 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 RNF2Q99496 336 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 RNF126Q9BV68 326 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 RHPN1-AS1Q9BWJ2 59 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 ATG5Q9H1Y0 275 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 ACOT13Q9NPJ3 140 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 ETV7Q9Y603 341 aa6.34□□□□□ -1.39
LSMEM1-202ENST00000439068 MUC4Q99102 2169 aa6.34□□□□□ -1.4
LSMEM1-202ENST00000439068 IGHV4-4A0A075B6R2 117 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 IGHV7-4-1A0A0J9YVY3 117 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 IGLC7A0M8Q6 106 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 UPK2O00526 184 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 CHEK1O14757 476 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 RBFOX2O43251 390 aaKnown RBP eCLIP6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 S1PR2O95136 353 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 HPRT1P00492 218 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 IFNA21P01568 189 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 IFNA17P01571 189 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 HLA-DMBP28068 263 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 ERVK-16P61578 105 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 CATR1Q13166 79 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 RCN1Q15293 331 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 MSMO1Q15800 293 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 TIMM50Q3ZCQ8 353 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 TMEM91Q6ZNR0 172 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 GBGT1Q8N5D6 347 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 ZNF114Q8NC26 417 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 DUSP18Q8NEJ0 188 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 NDUFAF3Q9BU61 184 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 FKBP14Q9NWM8 211 aa6.33□□□□□ -1.4
LSMEM1-202ENST00000439068 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 IGHV3OR16-8A0A075B7F1 116 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 SNAPC5O75971 98 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 SCGNO76038 276 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 IFNA10P01566 189 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 LGALS9BQ3B8N2 356 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 HACD4Q5VWC8 232 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 SCARB1Q8WTV0 552 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 SECTM1Q8WVN6 248 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 BORCS5Q969J3 196 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 DGCR14Q96DF8 476 aaKnown RBP6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 TMEM56Q96MV1 263 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 TXN2Q99757 166 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 GINS3Q9BRX5 216 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 CHRDL1Q9BU40 450 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 HINT2Q9BX68 163 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 FKBP11Q9NYL4 201 aa6.32□□□□□ -1.4
LSMEM1-202ENST00000439068 IGKV1D-8A0A087WSZ0 117 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 DEFB131BA0A096LNP1 70 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 IGHV3-21A0A0B4J1V1 117 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 IGKV1D-13A0A0B4J2D9 117 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 IFITM5A6NNB3 132 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 M0R2N4 97 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 CASQ2O14958 399 aaPredicted RBP6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 TNFSF12O43508 249 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 PRSS2P07478 247 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 CTSGP08311 255 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 GNAO1P09471 354 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 IGKV1-13P0DP09 117 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 SPP1P10451 314 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 MYL9P24844 172 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 GNG2P59768 71 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 RPS25P62851 125 aaKnown RBP6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 EIF4EBP1Q13541 118 aaPredicted RBP6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 MORN3Q6PF18 240 aaPredicted RBP6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 TCF24Q7RTU0 167 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 TPRA1Q86W33 373 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 TSPAN14Q8NG11 270 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 OR10W1Q8NGF6 305 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 GIMAP1Q8WWP7 306 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 LSM10Q969L4 123 aaKnown RBP6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 VCXQ9H320 206 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 TMEM231Q9H6L2 316 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 ANXA10Q9UJ72 324 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 LSM2Q9Y333 95 aaKnown RBP6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 TPRKBQ9Y3C4 175 aa6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 F11RQ9Y624 299 aaKnown RBP6.31□□□□□ -1.4
LSMEM1-202ENST00000439068 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 TRAV2A0A0B4J234 112 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 TRAV1-2A0A0B4J238 106 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 A0A0B4J293 547 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 TEX50A0A1B0GTY4 177 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 SULT1C2O00338 296 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 ST8SIA3O43173 380 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 GAGE7O76087 117 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 GAGE12FP0CL80 117 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 GAGE12GP0CL81 117 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 GAGE12IP0CL82 117 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 RAB3BP20337 219 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 FCGR2CP31995 323 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 DEFB131AP59861 70 aa6.3□□□□□ -1.4
LSMEM1-202ENST00000439068 FABP5Q01469 135 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms