RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FXYD2P54710 66 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 ERVK11-1P61568 191 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 SRSF1Q07955 248 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 DIAPH2-AS1Q14236 149 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 LGALS9BQ3B8N2 356 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 PRR30Q53SZ7 412 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 PRR31Q5SQ13 230 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 LGALS9CQ6DKI2 356 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 BCL6BQ8N143 479 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 TMEM178AQ8NBL3 297 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 OR9G1Q8NH87 305 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 PIFOQ8TCI5 191 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 DAZAP1Q96EP5 407 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 DNAJC30Q96LL9 226 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A10PA6NDY2 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A20PA6NIJ5 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A7PA6NKC0 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A22PA8MWA6 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A12PA8MX19 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A5PA8MXJ8 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A23PA8MXZ1 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 SPRY1O43609 319 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 UTS2O95399 124 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 SLC25A5P05141 298 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 SCTP09683 121 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A15PP0C7V4 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A13PP0C7W8 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A14PP0C7W9 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 FAM90A24PP0C7X0 464 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 EVI2AP22794 236 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 EDDM3BP56851 147 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 SMRP1Q8NCR6 262 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 MCRIP2Q9BUT9 160 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 TMEM131Q92545 1883 aa7.28□□□□□ -1.24
CDC42BPA-206ENST00000429440 SMIM9A6NGZ8 99 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 TGFBR3LH3BV60 316 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 CEACAM4O75871 244 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 GCSHP23434 173 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 RBM11P57052 281 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 H1FNTQ75WM6 255 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 SLC37A2Q8TED4 501 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 PPDPFLQ8WWR9 84 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 RPEQ96AT9 228 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 SOX21Q9Y651 276 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 ATP23Q9Y6H3 246 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 IFITM1P13164 125 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 MEOX1P50221 254 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 MRPS21P82921 87 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 GAGE2BQ13066 116 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 ZNF542PQ5EBM4 170 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGF2BP2-AS1Q96M15 143 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 RAB9BQ9NP90 201 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 ALKBH4Q9NXW9 302 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 DUSP13Q9UII6 198 aa7.27□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGKV1-6A0A0C4DH72 117 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 TCRBV4S1A1TA0A5B7 111 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 TNFSF11O14788 317 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 SCGB2A1O75556 95 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 CSN1S1P47710 185 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 TCTAP57738 103 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGLV3-21P80748 117 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 TTC32Q5I0X7 151 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 PCSK4Q6UW60 755 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 LINC00696Q6ZRV3 163 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 SRSF8Q9BRL6 282 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 MRPL32Q9BYC8 188 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 HEYLQ9NQ87 328 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 DEPPQ9NTK1 212 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 CACNA1IQ9P0X4 2223 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGKV1-27A0A075B6S5 117 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 TRAV5A0A0B4J249 113 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGKV1-12A0A0C4DH73 117 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 A8MWL6 223 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGKV1D-12P01611 117 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 HBBP68871 147 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 LY6DQ14210 128 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 DEFB110Q30KQ9 67 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 CFAP126Q5VTH2 177 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 FOXL2NBQ6ZUU3 175 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 NFE4Q86UQ8 179 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 FGFRL1Q8N441 504 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 FAM168AQ92567 244 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 TMEM167BQ9NRX6 74 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 SIGLEC9Q9Y336 463 aa7.26□□□□□ -1.25
CDC42BPA-206ENST00000429440 A0A1W2PQD3 144 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 C5orf63A6NC05 138 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 WISP2O76076 250 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGHG3P01860 377 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 MPV17P39210 176 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 CAMPP49913 170 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 ZNF766Q5HY98 468 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 Q6P435 159 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 BORCS8Q96FH0 119 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 IL36RNQ9UBH0 155 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 SLC25A10Q9UBX3 287 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 SPTY2D1-AS1A0A0U1RR47 76 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 MGST3O14880 152 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 ZIC3O60481 467 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms