RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 RAB9AP51151 201 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 SLC35B1P78383 322 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 SRSF2Q01130 221 aaKnown RBP9.73□□□□□ -0.85
TRIM39-207ENST00000428404 FOXE3Q13461 319 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 RPL7L1Q6DKI1 246 aaKnown RBP9.73□□□□□ -0.85
TRIM39-207ENST00000428404 TEX38Q6PEX7 206 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 FAM223AQ8IWN6 122 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 LILRB2Q8N423 598 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 UBAC2Q8NBM4 344 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 MYOZ3Q8TDC0 251 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 SCARB1Q8WTV0 552 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 MS4A10Q96PG2 267 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 PARD6GQ9BYG4 376 aaPredicted RBP9.73□□□□□ -0.85
TRIM39-207ENST00000428404 ARV1Q9H2C2 271 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 SLA2Q9H6Q3 261 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 ZNF355PQ9NSJ1 428 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 LSM4Q9Y4Z0 139 aaKnown RBP9.73□□□□□ -0.85
TRIM39-207ENST00000428404 ATRQ13535 2644 aa9.73□□□□□ -0.85
TRIM39-207ENST00000428404 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
TRIM39-207ENST00000428404 JTBO76095 146 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 IGHV3-48P01763 117 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 TRGV3P03979 118 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 ELANEP08246 267 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 FCGR2BP31994 310 aaPredicted RBP9.72□□□□□ -0.85
TRIM39-207ENST00000428404 C15orf32Q32M92 178 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 TREML4Q6UXN2 200 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 TMEM144Q7Z5S9 345 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 CENPVQ7Z7K6 275 aaPredicted RBP9.72□□□□□ -0.85
TRIM39-207ENST00000428404 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 COMMD1Q8N668 190 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 OR4F5Q8NH21 305 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 OR4X1Q8NH49 305 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 STOML3Q8TAV4 291 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 USMG5Q96IX5 58 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 NPVFQ9HCQ7 196 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 WDR83OSQ9Y284 106 aa9.72□□□□□ -0.85
TRIM39-207ENST00000428404 IGKV1OR2-108A0A075B7D4 117 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 IGHV3-21A0A0B4J1V1 117 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 MFSD2BA6NFX1 497 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 PF4V1P10720 104 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 ATP5G2Q06055 141 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 ZNF266Q14584 549 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 KLHDC1Q8N7A1 406 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 THAP8Q8NA92 274 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 ZNF502Q8TBZ5 544 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 NPIPB3Q92617 1050 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 SLC35E1Q96K37 410 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 CXorf58Q96LI9 332 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 ATP6V0BQ99437 205 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 TXN2Q99757 166 aa9.71□□□□□ -0.86
TRIM39-207ENST00000428404 WDR61Q9GZS3 305 aaKnown RBP9.71□□□□□ -0.86
TRIM39-207ENST00000428404 IGKV1D-37A0A075B6S9 117 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 BORCS7-ASMTA0A0B4J1R7 106 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 A0A0G2JLM5 398 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 UBE2L5PA0A1B0GUS4 154 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 CLPSL1A2RUU4 121 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 IFNA5P01569 189 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 RND2P52198 227 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 MFAP4P55083 255 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 PROK1P58294 105 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 TPPP2P59282 170 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 DEFA5Q01523 94 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 TCTEX1D4Q5JR98 221 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 BTNL8Q6UX41 500 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 LCNL1Q6ZST4 164 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 OR5AU1Q8NGC0 362 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 ACY3Q96HD9 319 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 GINS3Q9BRX5 216 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 ZNF471Q9BX82 626 aaPredicted RBP9.7□□□□□ -0.86
TRIM39-207ENST00000428404 C21orf62Q9NYP8 219 aa9.7□□□□□ -0.86
TRIM39-207ENST00000428404 TRBV7-1A0A0A6YYK4 115 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 SMCO3A2RU48 225 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 MPDU1O75352 247 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 CLN5O75503 358 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
TRIM39-207ENST00000428404 FGF7P21781 194 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 NPBWR1P48145 328 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 ACSM6Q6P461 480 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 TEPPQ6URK8 271 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 BAP18Q8IXM2 172 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 ZNF491Q8N8L2 437 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 CCDC140Q96MF4 163 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 MGST2Q99735 147 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 RNF114Q9Y508 228 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 S4R3C0 116 aa9.69□□□□□ -0.86
TRIM39-207ENST00000428404 A0A1B0GUS0 222 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 IGKV1-17P01599 117 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 CTSGP08311 255 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 TPT1P13693 172 aaKnown RBP9.68□□□□□ -0.86
TRIM39-207ENST00000428404 EIF5AP63241 154 aaKnown RBP9.68□□□□□ -0.86
TRIM39-207ENST00000428404 AKR1C1Q04828 323 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 ZNF343Q6P1L6 599 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 PRIMA1Q86XR5 153 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
TRIM39-207ENST00000428404 SCGB1C1Q8TD33 95 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 ST8SIA2Q92186 375 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 EEF1AKMT3Q96AZ1 226 aa9.68□□□□□ -0.86
TRIM39-207ENST00000428404 UBE2E2Q96LR5 201 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms