RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 PITX3O75364 302 aa12.98□□□□□ -0.33
LMCD1-204ENST00000426878 NOXA1Q86UR1 476 aa12.98□□□□□ -0.33
LMCD1-204ENST00000426878 SLC24A4Q8NFF2 622 aa12.98□□□□□ -0.33
LMCD1-204ENST00000426878 RNASEH2CQ8TDP1 164 aaKnown RBP12.98□□□□□ -0.33
LMCD1-204ENST00000426878 OR10C1Q96KK4 312 aa12.98□□□□□ -0.33
LMCD1-204ENST00000426878 CCDC32Q9BV29 185 aa12.98□□□□□ -0.33
LMCD1-204ENST00000426878 FNDC4Q9H6D8 234 aaPredicted RBP12.98□□□□□ -0.33
LMCD1-204ENST00000426878 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
LMCD1-204ENST00000426878 LINC00854A0A1B0GVQ3 168 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 PLA2G10O15496 165 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 TMEM50AO95807 157 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 FRMD6-AS1P0C7T7 363 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 OR4X1Q8NH49 305 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 U3KQ87 197 aa12.97□□□□□ -0.33
LMCD1-204ENST00000426878 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 C9orf170A2RU37 121 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 OPRK1P41145 380 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 ATP5IP56385 69 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-204ENST00000426878 BTNL8Q6UX41 500 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 OR1S1Q8NH92 325 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 TMEM170AQ8WVE7 144 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 WDR89Q96FK6 387 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-204ENST00000426878 C20orf24Q9BUV8 137 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 FLVCR2Q9UPI3 526 aa12.96□□□□□ -0.33
LMCD1-204ENST00000426878 FAM90A26D6RGX4 464 aa12.96□□□□□ -0.34
LMCD1-204ENST00000426878 CLN5O75503 358 aa12.96□□□□□ -0.34
LMCD1-204ENST00000426878 NPY1RP25929 384 aa12.96□□□□□ -0.34
LMCD1-204ENST00000426878 DTD1Q8TEA8 209 aa12.96□□□□□ -0.34
LMCD1-204ENST00000426878 S100ZQ8WXG8 99 aa12.96□□□□□ -0.34
LMCD1-204ENST00000426878 RBKSQ9H477 322 aa12.96□□□□□ -0.34
LMCD1-204ENST00000426878 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
LMCD1-204ENST00000426878 LYRM1O43325 122 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 NXPH3O95157 252 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 OR4E1P0C645 316 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 SLC25A4P12235 298 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 DHRS2Q13268 280 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 MLANAQ16655 118 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 GUCA2BQ16661 112 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 C11orf87Q6NUJ2 197 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 ZNF600Q6ZNG1 722 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 SBSPONQ8IVN8 264 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 NEURL2Q9BR09 285 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 MRPL36Q9P0J6 103 aaKnown RBP12.95□□□□□ -0.34
LMCD1-204ENST00000426878 SMPXQ9UHP9 88 aa12.95□□□□□ -0.34
LMCD1-204ENST00000426878 YIF1AO95070 293 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 CD81P60033 236 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 ETFRF1Q6IPR1 90 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 TOMM20LQ6UXN7 152 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
LMCD1-204ENST00000426878 LYG2Q86SG7 212 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 ASCL2Q99929 193 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 PTTG2Q9NZH5 202 aa12.94□□□□□ -0.34
LMCD1-204ENST00000426878 IGHV3OR16-8A0A075B7F1 116 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 TRAV30A0A087WSZ9 112 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 IGHV7-4-1A0A0J9YVY3 117 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 SCGB2A1O75556 95 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 IFNA10P01566 189 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 HOXB5P09067 269 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 CD7P09564 240 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 GGNBP1Q5YKI7 109 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 LAMTOR1Q6IAA8 161 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 PRSS54Q6PEW0 395 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 SLC16A13Q7RTY0 426 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 COQ8AQ8NI60 647 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 GINS3Q9BRX5 216 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 BATF3Q9NR55 127 aa12.93□□□□□ -0.34
LMCD1-204ENST00000426878 TRAV14DV4A0A0A6YYC5 116 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 TSPAN4O14817 238 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 MED6O75586 246 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 SCAF4O95104 1147 aaKnown RBP12.92□□□□□ -0.34
LMCD1-204ENST00000426878 IGKV1-17P01599 117 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
LMCD1-204ENST00000426878 SPAG8Q99932 426 aaPredicted RBP12.92□□□□□ -0.34
LMCD1-204ENST00000426878 ZFAND3Q9H8U3 227 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 PUS1Q9Y606 427 aaKnown RBP eCLIP12.92□□□□□ -0.34
LMCD1-204ENST00000426878 SELENOKQ9Y6D0 94 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 U3KQK5 164 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 STAB2Q8WWQ8 2551 aa12.92□□□□□ -0.34
LMCD1-204ENST00000426878 CHEK1O14757 476 aa12.91□□□□□ -0.34
LMCD1-204ENST00000426878 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
LMCD1-204ENST00000426878 C4orf46Q504U0 113 aa12.91□□□□□ -0.34
LMCD1-204ENST00000426878 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
LMCD1-204ENST00000426878 C20orf85Q9H1P6 137 aa12.91□□□□□ -0.34
LMCD1-204ENST00000426878 TUBA4BQ9H853 241 aa12.91□□□□□ -0.34
LMCD1-204ENST00000426878 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
LMCD1-204ENST00000426878 TCRBP04435 133 aa12.9□□□□□ -0.34
LMCD1-204ENST00000426878 IGLC1P0CG04 106 aa12.9□□□□□ -0.34
LMCD1-204ENST00000426878 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
LMCD1-204ENST00000426878 OR52B4Q8NGK2 314 aa12.9□□□□□ -0.34
LMCD1-204ENST00000426878 OR1S2Q8NGQ3 325 aa12.9□□□□□ -0.34
LMCD1-204ENST00000426878 MITD1Q8WV92 249 aa12.9□□□□□ -0.34
LMCD1-204ENST00000426878 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
LMCD1-204ENST00000426878 SYNGR2O43760 224 aa12.89□□□□□ -0.35
LMCD1-204ENST00000426878 ADAP1O75689 374 aa12.89□□□□□ -0.35
LMCD1-204ENST00000426878 IFNA21P01568 189 aa12.89□□□□□ -0.35
LMCD1-204ENST00000426878 CD5P06127 495 aa12.89□□□□□ -0.35
LMCD1-204ENST00000426878 BMI1P35226 326 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms