RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PLA2G10O15496 165 aa13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 YIF1AO95070 293 aa13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 MLANAQ16655 118 aa13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 BTNL8Q6UX41 500 aa13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 SLC24A4Q8NFF2 622 aa13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 WDR89Q96FK6 387 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 RBKSQ9H477 322 aa13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 FNDC4Q9H6D8 234 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-206ENST00000409141 C9orf170A2RU37 121 aa13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 LYRM1O43325 122 aa13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 TMEM50AO95807 157 aa13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 NHLRC4P0CG21 123 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 DTD1Q8TEA8 209 aa13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 CCDC32Q9BV29 185 aa13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
PDLIM2-206ENST00000409141 RPS10-NUDT3A0A1W2PQS6 291 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 K7EMT4 169 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 IFNA10P01566 189 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 HOXB5P09067 269 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 OR4E1P0C645 316 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 IGHV4-30-4P0DP06 118 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 C11orf87Q6NUJ2 197 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 RBPMS2Q6ZRY4 209 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 NOXA1Q86UR1 476 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 TMEM61Q8N0U2 210 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 S100ZQ8WXG8 99 aa13.52□□□□□ -0.25
PDLIM2-206ENST00000409141 C15orf62A8K5M9 175 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 PITX3O75364 302 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 SLC25A6P12236 298 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 ANXA7P20073 488 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 NPY1RP25929 384 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 CD81P60033 236 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 C4orf46Q504U0 113 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 OR4X1Q8NH49 305 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 RNASEH2CQ8TDP1 164 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 ZNF414Q96IQ9 312 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 U3KQ87 197 aa13.51□□□□□ -0.25
PDLIM2-206ENST00000409141 CLN5O75503 358 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 SCAF4O95104 1147 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 DHRS2Q13268 280 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 GGNBP1Q5YKI7 109 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 LYG2Q86SG7 212 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 SBSPONQ8IVN8 264 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 COQ8AQ8NI60 647 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 TMEM170AQ8WVE7 144 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 TUBA4BQ9H853 241 aa13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 MRPL36Q9P0J6 103 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-206ENST00000409141 TRAV25A0A0B4J276 109 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 SCGB2A1O75556 95 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 CD7P09564 240 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 OR10C1Q96KK4 312 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 C19orf73Q9NVV2 129 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 PTTG2Q9NZH5 202 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 COL7A1Q02388 2944 aa13.49□□□□□ -0.25
PDLIM2-206ENST00000409141 TRAV14DV4A0A0A6YYC5 116 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 A8MZ25 164 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 SLC25A4P12235 298 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 ETFRF1Q6IPR1 90 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 TOMM20LQ6UXN7 152 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 BATF3Q9NR55 127 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 SMPXQ9UHP9 88 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 PUS1Q9Y606 427 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 DNAH9Q9NYC9 4486 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 TRAV30A0A087WSZ9 112 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 IGHV7-4-1A0A0J9YVY3 117 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 FAM90A26D6RGX4 464 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 MED6O75586 246 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 ADAP1O75689 374 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 IFNA21P01568 189 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 TCRBP04435 133 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 LAMTOR1Q6IAA8 161 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 PRSS54Q6PEW0 395 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 TMEM116Q8NCL8 245 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 OR52B4Q8NGK2 314 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 GINS3Q9BRX5 216 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 C20orf85Q9H1P6 137 aa13.48□□□□□ -0.25
PDLIM2-206ENST00000409141 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
PDLIM2-206ENST00000409141 IFNA4P05014 189 aa13.47□□□□□ -0.25
PDLIM2-206ENST00000409141 IAPPP10997 89 aa13.47□□□□□ -0.25
PDLIM2-206ENST00000409141 RND2P52198 227 aa13.47□□□□□ -0.25
PDLIM2-206ENST00000409141 ATP5IP56385 69 aaPredicted RBP13.47□□□□□ -0.25
PDLIM2-206ENST00000409141 RHPN1-AS1Q9BWJ2 59 aa13.47□□□□□ -0.25
PDLIM2-206ENST00000409141 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
PDLIM2-206ENST00000409141 OR11H12B2RN74 326 aa13.46□□□□□ -0.25
PDLIM2-206ENST00000409141 CHEK1O14757 476 aa13.46□□□□□ -0.25
PDLIM2-206ENST00000409141 ZNF846Q147U1 533 aa13.46□□□□□ -0.25
PDLIM2-206ENST00000409141 TIGITQ495A1 244 aa13.46□□□□□ -0.25
PDLIM2-206ENST00000409141 DEFB125Q8N687 156 aa13.46□□□□□ -0.25
PDLIM2-206ENST00000409141 WDR12Q9GZL7 423 aaKnown RBP13.46□□□□□ -0.25
PDLIM2-206ENST00000409141 U3KQK5 164 aa13.46□□□□□ -0.25
PDLIM2-206ENST00000409141 TRAV6A0A075B6T7 132 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 IGHV3OR16-13A0A075B7E8 117 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 IGHV3-74A0A0B4J1X5 117 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 TSPAN4O14817 238 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 SYNGR2O43760 224 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms