RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 LINC00312Q9Y6C7 94 aa7.12□□□□□ -1.27
GABRA1-202ENST00000393943 SHANK1Q9Y566 2161 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 LINC00473A8K010 186 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 SRRM5B3KS81 715 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 SAA2P0DJI9 122 aaPredicted RBP7.11□□□□□ -1.27
GABRA1-202ENST00000393943 MPV17L2Q567V2 206 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 ITLN1Q8WWA0 313 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 IGHV2-70DA0A0C4DH43 119 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 PRRG2O14669 202 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 PAX1P15863 534 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 GCSHP23434 173 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 HES1Q14469 280 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 MBNL2Q5VZF2 373 aaKnown RBP7.11□□□□□ -1.27
GABRA1-202ENST00000393943 OR9G1Q8NH87 305 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 K7EP13 123 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 HBDP02042 147 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 MEGF9Q9H1U4 602 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 INSIG2Q9Y5U4 225 aa7.11□□□□□ -1.27
GABRA1-202ENST00000393943 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 DKK1O94907 266 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 SPATA31B1PQ5VZV4 182 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 RPRMLQ8N4K4 120 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 RND1Q92730 232 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 PPIAL4EA0A075B759 164 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 LOC102724200A0A096LPH7 203 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-202ENST00000393943 ZNF785A8K8V0 405 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 PPIAL4DF5H284 164 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 SLC25A17O43808 307 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 OR2J3O76001 311 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 ORM1P02763 201 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 PPIAL4FP0DN26 164 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 STPG4Q8N801 248 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 COQ2Q96H96 371 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 Q9H3A6 140 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 TMEM14BQ9NUH8 114 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 PPIAL4AQ9Y536 164 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 A0A1B0GUS0 222 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 NTN3O00634 580 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-202ENST00000393943 RPL7P18124 248 aaKnown RBP7.1□□□□□ -1.27
GABRA1-202ENST00000393943 CD33P20138 364 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 GPR6P46095 362 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-202ENST00000393943 FAM71F2Q6NXP2 309 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 SAA1P0DJI8 122 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-202ENST00000393943 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 ZNF114Q8NC26 417 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 FAM222BQ8WU58 562 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 ST6GALNAC6Q969X2 333 aa7.1□□□□□ -1.27
GABRA1-202ENST00000393943 URB1O60287 2271 aaKnown RBP7.1□□□□□ -1.27
GABRA1-202ENST00000393943 TOMM40O96008 361 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 CECR9P0C854 216 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 ZNF883P0CG24 379 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 IGHV1-2P23083 117 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 LPAL2Q16609 132 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 CDCP2Q5VXM1 449 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 TTC9CQ8N5M4 171 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 CCL13Q99616 98 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 SLC25A2Q9BXI2 301 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 AKIRIN1Q9H9L7 192 aaPredicted RBP7.09□□□□□ -1.27
GABRA1-202ENST00000393943 RABAC1Q9UI14 185 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 H3BRM9 83 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 H3BUT2 72 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 POU2AF1Q16633 256 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 CRIP3Q6Q6R5 217 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 TRGV9Q99603 122 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 SIGMAR1Q99720 223 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
GABRA1-202ENST00000393943 LTBRP36941 435 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 PRR20EP86478 221 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 PRR20CP86479 221 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 PRR20DP86480 221 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 PRR20BP86481 221 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 PRR20AP86496 221 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 LCN12Q6JVE5 192 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 HS3ST6Q96QI5 342 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 PROK2Q9HC23 129 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 CLEC5AQ9NY25 188 aa7.09□□□□□ -1.27
GABRA1-202ENST00000393943 PMS2P5A8MQ11 134 aa7.09□□□□□ -1.28
GABRA1-202ENST00000393943 SP9P0CG40 484 aa7.09□□□□□ -1.28
GABRA1-202ENST00000393943 LYPD1Q8N2G4 141 aa7.09□□□□□ -1.28
GABRA1-202ENST00000393943 NXT2Q9NPJ8 142 aaKnown RBP7.09□□□□□ -1.28
GABRA1-202ENST00000393943 LSM4Q9Y4Z0 139 aaKnown RBP7.09□□□□□ -1.28
GABRA1-202ENST00000393943 LOC389332A0A1B0GUA5 103 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 FOXH1O75593 365 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 SCGB1C2P0DMR2 95 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 C5orf24Q7Z6I8 188 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 ODF3L1Q8IXM7 274 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 FAM169BQ8N8A8 192 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 RAB37Q96AX2 223 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 R4GN57 208 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 RTTNQ86VV8 2226 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 PLAUP00749 431 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 SMIM17P0DL12 118 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 PAX2Q02962 417 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 PVRIGQ6DKI7 326 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 WFDC8Q8IUA0 241 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 ZNRF1Q8ND25 227 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 C8orf46Q8TAG6 207 aa7.08□□□□□ -1.28
GABRA1-202ENST00000393943 C1RLQ9NZP8 487 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms