RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 FAM90A2PQ658T7 463 aa11.89□□□□□ -0.51
HCG27-201ENST00000383331 PRSS57Q6UWY2 283 aa11.89□□□□□ -0.51
HCG27-201ENST00000383331 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
HCG27-201ENST00000383331 MALSU1Q96EH3 234 aa11.89□□□□□ -0.51
HCG27-201ENST00000383331 SLC35E1Q96K37 410 aa11.89□□□□□ -0.51
HCG27-201ENST00000383331 A0A096LNT2 108 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 C7orf77A4D0Y5 90 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 FCN1O00602 326 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 TSPAN4O14817 238 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 NBR2O15453 112 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 AREGP15514 252 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 PSMB3P49720 205 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 CD81P60033 236 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
HCG27-201ENST00000383331 SSX2Q16385 188 aa11.88□□□□□ -0.51
HCG27-201ENST00000383331 EAF1Q96JC9 268 aaPredicted RBP11.88□□□□□ -0.51
HCG27-201ENST00000383331 SRSF8Q9BRL6 282 aaKnown RBP11.88□□□□□ -0.51
HCG27-201ENST00000383331 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 H3BQ15 152 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 REG1AP05451 166 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 CRYGCP07315 174 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 STAG3L2P0CL84 134 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 STAG3L3P0CL85 134 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 OR10J1P30954 320 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 MFAP2P55001 183 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 GNB1P62873 340 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 LOXL1Q08397 574 aaPredicted RBP11.87□□□□□ -0.51
HCG27-201ENST00000383331 RHEBQ15382 184 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 MMDQ15546 238 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 OR2T6Q8NHC8 308 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 ABHD5Q8WTS1 349 aa11.87□□□□□ -0.51
HCG27-201ENST00000383331 SRSF12Q8WXF0 261 aaKnown RBP11.87□□□□□ -0.51
HCG27-201ENST00000383331 PUS1Q9Y606 427 aaKnown RBP eCLIP11.87□□□□□ -0.51
HCG27-201ENST00000383331 M0R036 132 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 SNRNP70P08621 437 aaKnown RBP11.86□□□□□ -0.51
HCG27-201ENST00000383331 PAX6P26367 422 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 CEBPGP53567 150 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 RHOBP62745 196 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 EBI3Q14213 229 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 Q8N6K4 173 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 WFDC11Q8NEX6 87 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 OR2T10Q8NGZ9 312 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 GATAD1Q8WUU5 269 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 C17orf50Q8WW18 174 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 AJUBAQ96IF1 538 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 CXorf1O96002 111 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 PLGLAQ15195 96 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 FBLN7Q53RD9 439 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 C20orf24Q9BUV8 137 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 GSX1Q9H4S2 264 aaPredicted RBP11.86□□□□□ -0.51
HCG27-201ENST00000383331 SEPSECSQ9HD40 501 aaKnown RBP11.86□□□□□ -0.51
HCG27-201ENST00000383331 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 SMCO4Q9NRQ5 59 aa11.86□□□□□ -0.51
HCG27-201ENST00000383331 F11RQ9Y624 299 aaKnown RBP11.86□□□□□ -0.51
HCG27-201ENST00000383331 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 TMEM250H0YL14 139 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 NPFFO15130 113 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 CD24P25063 80 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 AKIRIN2Q53H80 203 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 ETFRF1Q6IPR1 90 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 CYP2G1PQ6ZSU1 146 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 LINC01356Q8N9X3 169 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 TVP23CQ96ET8 276 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 ACY3Q96HD9 319 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 NIPSNAP3BQ9BS92 247 aa11.85□□□□□ -0.51
HCG27-201ENST00000383331 MRPL36Q9P0J6 103 aaKnown RBP11.85□□□□□ -0.51
HCG27-201ENST00000383331 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 CORTO00230 105 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 PAGE4O60829 102 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 SAA4P35542 130 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 AKR1C3P42330 323 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 C5orf64Q2M2E5 130 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 Q5PR19 223 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 SPATA31B1PQ5VZV4 182 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 IQCF2Q8IXL9 164 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 NPIPB3Q92617 1050 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 TUBA4BQ9H853 241 aa11.84□□□□□ -0.51
HCG27-201ENST00000383331 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.84□□□□□ -0.51
HCG27-201ENST00000383331 GATA2P23769 480 aaPredicted RBP11.83□□□□□ -0.52
HCG27-201ENST00000383331 BRS3P32247 399 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 HES1Q14469 280 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 MISP3Q96FF7 219 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 FUT9Q9Y231 359 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 DMRT1Q9Y5R6 373 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 IGHV1-69DA0A0B4J2H0 117 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 TCRBV4S1A1TA0A5B7 111 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 PSMB11A5LHX3 300 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 J3QLI3 93 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 CNIH1O95406 144 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 IGHV1-69P01742 117 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 OR5G3P0C626 314 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 APELAP0DMC3 54 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 NANPQ8TBE9 248 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 SLC25A33Q9BSK2 321 aa11.83□□□□□ -0.52
HCG27-201ENST00000383331 HIF1ANQ9NWT6 349 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms