RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 MUC21A0A0G2JKD1 596 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 MUC21A0A140T8X8 626 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 TCAPO15273 167 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 CD69Q07108 199 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 TWIST1Q15672 202 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 MUC21Q5SSG8 566 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 LYPD2Q6UXB3 125 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 MBNL3Q9NUK0 354 aaKnown RBP10.88□□□□□ -0.67
NPHP4-203ENST00000378169 FBXL7Q9UJT9 491 aa10.88□□□□□ -0.67
NPHP4-203ENST00000378169 MGPP08493 103 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 Q6ZS49 121 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM191AQ9H0A3 160 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 CBLN4Q9NTU7 201 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 C21orf62Q9NYP8 219 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 LOC105371267A0A1B0GV96 52 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 IGKV1-16P04430 117 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 GPX4P36969 197 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM14EPQ6UXP3 125 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 ZNF738Q8NE65 137 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 GGTLC1Q9BX51 225 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 TEX50A0A1B0GTY4 177 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 DUX4L9Q6RFH8 374 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-203ENST00000378169 GLRX5Q86SX6 157 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 ELOVL1Q9BW60 279 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 ANKRD11Q6UB99 2663 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-203ENST00000378169 ABCA2Q9BZC7 2435 aa10.87□□□□□ -0.67
NPHP4-203ENST00000378169 RNF138Q8WVD3 245 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
NPHP4-203ENST00000378169 CDH23Q9H251 3354 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 SPTBN4Q9H254 2564 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 A0A1W2PNU3 283 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-203ENST00000378169 IGLV3-1P01715 115 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 CA7P43166 264 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 RELBQ01201 579 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 RNASEH2CQ8TDP1 164 aaKnown RBP10.86□□□□□ -0.67
NPHP4-203ENST00000378169 MLANAQ16655 118 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 ARPC1AQ92747 370 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 GAFA1Q96PS6 74 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 C7orf69Q9H7B7 122 aa10.86□□□□□ -0.67
NPHP4-203ENST00000378169 PEX7O00628 323 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 NBR2O15453 112 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 RNF224P0DH78 156 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 DLX1P56177 255 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 GNG5P63218 68 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 SPATA31B1PQ5VZV4 182 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 TMEM116Q8NCL8 245 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 MBD3L1Q8WWY6 194 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 FAM168AQ92567 244 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 MAP1LC3CQ9BXW4 147 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 SEPSECSQ9HD40 501 aaKnown RBP10.85□□□□□ -0.67
NPHP4-203ENST00000378169 TNCP24821 2201 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 TRAV5A0A0B4J249 113 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 OR2T8A6NH00 312 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 C9JQL5 133 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 NPPCP23582 126 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 TM4SF20Q53R12 229 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 LINC00527Q9UJ94 153 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 CHD8Q9HCK8 2581 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 FOXI3A8MTJ6 420 aaPredicted RBP10.85□□□□□ -0.67
NPHP4-203ENST00000378169 TRGV3P03979 118 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 THBDP07204 575 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 IGHV1-8P0DP01 117 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
NPHP4-203ENST00000378169 KLRD1Q13241 179 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 K7EM74 188 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 MAS1LP35410 378 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 TCF23Q7RTU1 214 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 ANAPC10Q9UM13 185 aa10.85□□□□□ -0.67
NPHP4-203ENST00000378169 BPTFQ12830 3046 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 IGHV2-26A0A0B4J1V2 119 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 M0R143 59 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 IGHV3-11P01762 117 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 PKIAP61925 76 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 ADAMTS9Q9P2N4 1935 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 TDGF1P13385 188 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 ADCYAP1P18509 176 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 CKS2P33552 79 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 KLF17Q5JT82 389 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-203ENST00000378169 OCC1Q8TAD7 63 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 DERL1Q9BUN8 251 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 ZNF106Q9H2Y7 1883 aaKnown RBP10.84□□□□□ -0.67
NPHP4-203ENST00000378169 ATOH7Q8N100 152 aa10.84□□□□□ -0.67
NPHP4-203ENST00000378169 E7EQL1 145 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 COL8A2P25067 703 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 PAFAH1B2P68402 229 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 AUP1Q9Y679 476 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 A0A087WWC5 75 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 LYL1P12980 280 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 CLEC19AQ6UXS0 136 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 PIP4P1Q86T03 277 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 GSX1Q9H4S2 264 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-203ENST00000378169 TLN2Q9Y4G6 2542 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 C15orf62A8K5M9 175 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 DYNLRB2Q8TF09 96 aa10.83□□□□□ -0.68
NPHP4-203ENST00000378169 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms