RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 BCL2P10415 239 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 TMEM11P17152 192 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 RPL29P47914 159 aaKnown RBP10.29□□□□□ -0.76
TRIM40-206ENST00000376724 MFAP2P55001 183 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 KRTAP10-9P60411 292 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 PAX8Q06710 450 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 CLEC12BQ2HXU8 276 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 RUSC1-AS1Q66K80 236 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 CACNG8Q8WXS5 425 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 AJUBAQ96IF1 538 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 PFDN5Q99471 154 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 SOX15O60248 233 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 MT-ND4LP03901 98 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 SRP19P09132 144 aaKnown RBP10.29□□□□□ -0.76
TRIM40-206ENST00000376724 FXYD3Q14802 87 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 KHDC3LQ587J8 217 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 SOHLH1Q5JUK2 328 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 GATAD1Q8WUU5 269 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 NPIPB3Q92617 1050 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 SMDT1Q9H4I9 107 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 ABCA2Q9BZC7 2435 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 IFNA1P01562 189 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 HSPB1P04792 205 aaKnown RBP10.28□□□□□ -0.76
TRIM40-206ENST00000376724 DEFA6Q01524 100 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 C20orf24Q9BUV8 137 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 MRPL36Q9P0J6 103 aaKnown RBP10.28□□□□□ -0.76
TRIM40-206ENST00000376724 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 TRAV40A0A0B4J280 105 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 SEC14L6B5MCN3 397 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 LINC00869P0C866 280 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 FAM106CPP0CH98 169 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 DSCR9P59020 149 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 PRR20EP86478 221 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 PRR20CP86479 221 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 PRR20DP86480 221 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 PRR20BP86481 221 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 PRR20AP86496 221 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 BRD3OSQ6XYD6 125 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 ZNF114Q8NC26 417 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 CSMD1Q96PZ7 3565 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 SLC25A33Q9BSK2 321 aa10.28□□□□□ -0.76
TRIM40-206ENST00000376724 SEPSECSQ9HD40 501 aaKnown RBP10.28□□□□□ -0.76
TRIM40-206ENST00000376724 M0R036 132 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 AP4M1O00189 453 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 MSMBP08118 114 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 BRS3P32247 399 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 RND2P52198 227 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 EBI3Q14213 229 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 SPATA31B1PQ5VZV4 182 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 SLC35E3Q7Z769 313 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 Q8N6K4 173 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 OR1P1Q8NH06 330 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 TUBA4BQ9H853 241 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRIM40-206ENST00000376724 F11RQ9Y624 299 aaKnown RBP10.27□□□□□ -0.77
TRIM40-206ENST00000376724 FBN2P35556 2912 aa10.27□□□□□ -0.77
TRIM40-206ENST00000376724 ARL14EPLP0DKL9 152 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 PAX1P15863 534 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 PSMB3P49720 205 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 C9orf152Q5JTZ5 239 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 C7orf69Q9H7B7 122 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 IGHV1-69DA0A0B4J2H0 117 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 MT-CO2P00403 227 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 IGHV1-69P01742 117 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 AKR1C3P42330 323 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 UBE2G2P60604 165 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 RHOBP62745 196 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 CX3CL1P78423 397 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 ZNF90Q03938 601 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 FAM78BQ5VT40 261 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 ETFRF1Q6IPR1 90 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 CYP2G1PQ6ZSU1 146 aa10.26□□□□□ -0.77
TRIM40-206ENST00000376724 PAGE4O60829 102 aa10.25□□□□□ -0.77
TRIM40-206ENST00000376724 ZNF562Q6V9R5 426 aa10.25□□□□□ -0.77
TRIM40-206ENST00000376724 MAPK1IP1LQ8NDC0 245 aa10.25□□□□□ -0.77
TRIM40-206ENST00000376724 HIF1ANQ9NWT6 349 aa10.25□□□□□ -0.77
TRIM40-206ENST00000376724 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
TRIM40-206ENST00000376724 B4DSR2 109 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 CORTO00230 105 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 IGHV4-38-2P0DP08 117 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 SLC25A16P16260 332 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 MEF2BQ02080 365 aaPredicted RBP10.24□□□□□ -0.77
TRIM40-206ENST00000376724 AWAT1Q58HT5 328 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 PVRIGQ6DKI7 326 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 MIR17HGQ75NE6 70 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 ARPC1AQ92747 370 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 RPS10P5Q9NQ39 176 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 MANBALQ9NQG1 85 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 DOK5Q9P104 306 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 CELSR2Q9HCU4 2923 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 IGKV1D-37A0A075B6S9 117 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 TCRBV4S1A1TA0A5B7 111 aa10.24□□□□□ -0.77
TRIM40-206ENST00000376724 CXorf1O96002 111 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms