RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 IMMP2LQ96T52 175 aa8.29□□□□□ -1.08
TRERF1-204ENST00000372922 SLC50A1Q9BRV3 221 aa8.29□□□□□ -1.08
TRERF1-204ENST00000372922 SEPSECSQ9HD40 501 aaKnown RBP8.29□□□□□ -1.08
TRERF1-204ENST00000372922 LOC102723996A0A087X1L8 192 aa8.29□□□□□ -1.08
TRERF1-204ENST00000372922 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
TRERF1-204ENST00000372922 A8MWV9 139 aa8.29□□□□□ -1.08
TRERF1-204ENST00000372922 HOXA5P20719 270 aa8.29□□□□□ -1.08
TRERF1-204ENST00000372922 TCF23Q7RTU1 214 aa8.29□□□□□ -1.08
TRERF1-204ENST00000372922 TOMM7Q9P0U1 55 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 PROB1E7EW31 1015 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 HOXA3O43365 443 aaPredicted RBP8.28□□□□□ -1.08
TRERF1-204ENST00000372922 TTC9CQ8N5M4 171 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 VGLL1Q99990 258 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 SCN8AQ9UQD0 1980 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 CACNA1GO43497 2377 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 TRACP01848 142 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 CFHR1Q03591 330 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 NSUN5P1Q3KNT7 163 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 PVRIGQ6DKI7 326 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 FER1L6-AS1Q8NA97 138 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 Q9H3A6 140 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 TRAV14DV4A0A0A6YYC5 116 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 WNT2P09544 360 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 H2BFSP57053 126 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 RASL11AQ6T310 242 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 NEUROG1Q92886 237 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 RPP21Q9H633 154 aaKnown RBP8.28□□□□□ -1.08
TRERF1-204ENST00000372922 OTORQ9NRC9 128 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 ASCL2Q99929 193 aa8.28□□□□□ -1.08
TRERF1-204ENST00000372922 MDC1Q14676 2089 aaKnown RBP8.27□□□□□ -1.08
TRERF1-204ENST00000372922 BRCA1P38398 1863 aaKnown RBP8.27□□□□□ -1.08
TRERF1-204ENST00000372922 IGKV1D-43A0A0B4J1Z2 117 aa8.27□□□□□ -1.08
TRERF1-204ENST00000372922 UPK2O00526 184 aa8.27□□□□□ -1.08
TRERF1-204ENST00000372922 TMEM42Q69YG0 159 aa8.27□□□□□ -1.08
TRERF1-204ENST00000372922 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.08
TRERF1-204ENST00000372922 IL36BQ9NZH7 164 aa8.27□□□□□ -1.08
TRERF1-204ENST00000372922 ARID2Q68CP9 1835 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 TRBV7-9A0A0J9YWB2 115 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 SAA1P0DJI8 122 aaPredicted RBP8.27□□□□□ -1.09
TRERF1-204ENST00000372922 TFF3Q07654 80 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 ZNF236Q9UL36 1845 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 SAA2-SAA4A0A096LPE2 208 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 CD7P09564 240 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 SAA2P0DJI9 122 aaPredicted RBP8.27□□□□□ -1.09
TRERF1-204ENST00000372922 CCL3L1P16619 93 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 ZFP36L1Q07352 338 aaKnown RBP8.27□□□□□ -1.09
TRERF1-204ENST00000372922 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 CD33P20138 364 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 MPTX1A8MV57 137 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 CRPP02741 224 aa8.27□□□□□ -1.09
TRERF1-204ENST00000372922 PRB3Q04118 309 aaPredicted RBP8.27□□□□□ -1.09
TRERF1-204ENST00000372922 RCC1LQ96I51 464 aaKnown RBP8.27□□□□□ -1.09
TRERF1-204ENST00000372922 CD8AP01732 235 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 MGST2Q99735 147 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 SPRR3Q9UBC9 169 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 WDR90Q96KV7 1748 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 SLC25A20O43772 301 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 IFITM3Q01628 133 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 SLC25A28Q96A46 364 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 VWCEQ96DN2 955 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 SPTBP11277 2137 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 IL18BPO95998 194 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 APOHP02749 345 aaPredicted RBP8.26□□□□□ -1.09
TRERF1-204ENST00000372922 RHOGP84095 191 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 IGHV3OR16-8A0A075B7F1 116 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 TRGV4A0A0C4DH28 118 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 PDCD11Q14690 1871 aaKnown RBP8.26□□□□□ -1.09
TRERF1-204ENST00000372922 COL4A1P02462 1669 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 IGHV1-18A0A0C4DH31 117 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 C20orf204Q6ZNR8 217 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 WBP1Q96G27 269 aa8.26□□□□□ -1.09
TRERF1-204ENST00000372922 IGKV3D-20A0A0C4DH25 116 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 LINC00114Q6XXX2 140 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 TRGV11A0A075B6L2 103 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 LINC00271P0C7V0 271 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 ZNF688P0C7X2 276 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 RALGAPA2Q2PPJ7 1873 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 ZXDCQ2QGD7 858 aaPredicted RBP8.25□□□□□ -1.09
TRERF1-204ENST00000372922 MORN2Q502X0 79 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 PSMG4Q5JS54 123 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 ST20Q9HBF5 79 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 TRAV40A0A0B4J280 105 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 EGR1P18146 543 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 TIMP3P35625 211 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 NPC2P61916 151 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 ZNF497Q6ZNH5 498 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
TRERF1-204ENST00000372922 PTPRFP10586 1907 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 IGLV3-32A0A0A0MS00 114 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 SCO2A0A1W2PP80 73 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 GAGE12BA1L429 117 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 CD59P13987 128 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 TMEM144Q7Z5S9 345 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 ORMDL3Q8N138 153 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 SMIM20Q8N5G0 67 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 LSM4Q9Y4Z0 139 aaKnown RBP8.25□□□□□ -1.09
TRERF1-204ENST00000372922 SBF2Q86WG5 1849 aa8.25□□□□□ -1.09
TRERF1-204ENST00000372922 C15orf61A6NNL5 157 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms