RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 HILPDAQ9Y5L2 63 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 TNCP24821 2201 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 C15orf61A6NNL5 157 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 ADMP35318 185 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 LCN2P80188 198 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 RPRMLQ8N4K4 120 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 Q8NFD4 153 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 OR4F17Q8NGA8 305 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 FAM222BQ8WU58 562 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 PMCHL2Q9BQD1 86 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 NCOR1P1Q9H4R4 102 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 NRN1Q9NPD7 142 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 POLR3KQ9Y2Y1 108 aaPredicted RBP10.14□□□□□ -0.79
COL20A1-201ENST00000358894 SLC25A15Q9Y619 301 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 CEP192Q8TEP8 1941 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 SAA1P0DJI8 122 aaPredicted RBP10.13□□□□□ -0.79
COL20A1-201ENST00000358894 ERVK11-1P61568 191 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 ZNF726P1Q15940 193 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 HAPLN4Q86UW8 402 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 GGTLC1Q9BX51 225 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 PGPA6NDG6 321 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 C15orf62A8K5M9 175 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 IGHV1-46P01743 117 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 COL8A1P27658 744 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 COX19Q49B96 90 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 ASCL5Q7RTU5 278 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 RASL11BQ9BPW5 248 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 PEF1Q9UBV8 284 aaKnown RBP10.13□□□□□ -0.79
COL20A1-201ENST00000358894 AMMECR1Q9Y4X0 333 aaPredicted RBP10.13□□□□□ -0.79
COL20A1-201ENST00000358894 YTHDF2Q9Y5A9 579 aaKnown RBP10.13□□□□□ -0.79
COL20A1-201ENST00000358894 A0A1W2PNU3 283 aaPredicted RBP10.13□□□□□ -0.79
COL20A1-201ENST00000358894 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.13□□□□□ -0.79
COL20A1-201ENST00000358894 IGKV1D-33P01593 117 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 IGKV1-33P01594 117 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 SPATA31B1PQ5VZV4 182 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 Q6ZPA2 131 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 PRR7Q8TB68 274 aa10.13□□□□□ -0.79
COL20A1-201ENST00000358894 HYPMO75409 117 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 P01737 135 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 IGHG3P01860 377 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 NAA38Q9BRA0 125 aaKnown RBP10.12□□□□□ -0.79
COL20A1-201ENST00000358894 TRIOO75962 3097 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 M0QZ24 198 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 CCL21O00585 134 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 EFNB3Q15768 340 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 OR10W1Q8NGF6 305 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 OR9G1Q8NH87 305 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 RAB1CQ92928 201 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 IFI27L2Q9H2X8 130 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 TM4SF20Q53R12 229 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 MBNL2Q5VZF2 373 aaKnown RBP10.12□□□□□ -0.79
COL20A1-201ENST00000358894 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 OCC1Q8TAD7 63 aa10.12□□□□□ -0.79
COL20A1-201ENST00000358894 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
COL20A1-201ENST00000358894 C17orf100A8MU93 164 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 RBFOX2O43251 390 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 MC5RP33032 325 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 C10orf55Q5SWW7 151 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 LINC01560Q8TB33 94 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 ZNRD1Q9P1U0 126 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 LOC389332A0A1B0GUA5 103 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 KRTAP27-1Q3LI81 207 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 LCN12Q6JVE5 192 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 ZNF474Q6S9Z5 364 aaPredicted RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 AAMDCQ9H7C9 122 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 F11RQ9Y624 299 aaKnown RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 TRANK1O15050 2925 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 PRSS1P07477 247 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 SELENOTP62341 195 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 OSR1Q8TAX0 266 aaPredicted RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 FAM57AQ8TBR7 257 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 RNASE8Q8TDE3 154 aaKnown RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 ORAOV1Q8WV07 137 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 RAB1BQ9H0U4 201 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 MT-ND6P03923 174 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 HIST1H1EP10412 219 aaKnown RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 TDGF1P13385 188 aa10.11□□□□□ -0.79
COL20A1-201ENST00000358894 CEACAM8P31997 349 aaPredicted RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.11□□□□□ -0.79
COL20A1-201ENST00000358894 TMSB15BA0A087X1C1 80 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 BMI1P35226 326 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 STXBP6Q8NFX7 210 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 KCNS1Q96KK3 526 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 MGST2Q99735 147 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
COL20A1-201ENST00000358894 IGHV1-69-2A0A0G2JMI3 117 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 UPK2O00526 184 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 GFRA3O60609 400 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 ARF6P62330 175 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 TMEM144Q7Z5S9 345 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 TMEM186Q96B77 213 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms