RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 NKX2-1P43699 371 aaPredicted RBP2.7□□□□□ -1.98
CCDC66-202ENST00000341455 NDPQ00604 133 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 FGL1Q08830 312 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 TCTEX1D4Q5JR98 221 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 ZNF343Q6P1L6 599 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 RBMS3Q6XE24 437 aaKnown RBP2.7□□□□□ -1.98
CCDC66-202ENST00000341455 LGI3Q8N145 548 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 ZNF491Q8N8L2 437 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 OR51H1Q8NH63 302 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 MARCH1Q8TCQ1 289 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 ZNF431Q8TF32 576 aaPredicted RBP2.7□□□□□ -1.98
CCDC66-202ENST00000341455 MAFIPQ8WZ33 124 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 ARPC1AQ92747 370 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 MRPL53Q96EL3 112 aaKnown RBP2.7□□□□□ -1.98
CCDC66-202ENST00000341455 HSPB9Q9BQS6 159 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 NMES1Q9C002 83 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 Q9H8V8 135 aa2.7□□□□□ -1.98
CCDC66-202ENST00000341455 LYSTQ99698 3801 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 TEX50A0A1B0GTY4 177 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 CORTO00230 105 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 HSPA12AO43301 675 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 IFNA6P05013 189 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 OR4E1P0C645 316 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 C8orf88P0DMB2 117 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 ELLP55199 621 aaPredicted RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 DLX1P56177 255 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SPCS3P61009 180 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 RPL8P62917 257 aaKnown RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 IL17RELQ6ZVW7 336 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SGPP2Q8IWX5 399 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SPAG16Q8N0X2 631 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 CENPSQ8N2Z9 138 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 OR1P1Q8NH06 330 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 RNASEH2CQ8TDP1 164 aaKnown RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 IL1F10Q8WWZ1 152 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 GGACTQ9BVM4 153 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 ZNF430Q9H8G1 570 aaPredicted RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 GSN-AS1Q9NRJ2 163 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 FBXO7Q9Y3I1 522 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 NBASA2RRP1 2371 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 ZFHX3Q15911 3703 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 TRAV2A0A0B4J234 112 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 TRAV41A0A0B4J266 112 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 PMS2P5A8MQ11 134 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 CA2P00918 260 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 MYCNOSP40205 109 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 LPAR6P43657 344 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 DEFA1P59665 94 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 DEFA3P59666 94 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SEC61GP60059 68 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 HSPE1P61604 102 aaKnown RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 CTAG1AP78358 180 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 CX3CL1P78423 397 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 DHRS2Q13268 280 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 EXOSC2Q13868 293 aaKnown RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SMCO1Q147U7 214 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 MOB3BQ86TA1 216 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 TCTEX1D2Q8WW35 142 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 TMEM18Q96B42 140 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SMIM8Q96KF7 97 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 P2RX4Q99571 388 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SPIN2AQ99865 258 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 RASL11BQ9BPW5 248 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 SPIN2BQ9BPZ2 258 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 CHRDL1Q9BU40 450 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 METTL1Q9UBP6 276 aaKnown RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 TSSC4Q9Y5U2 329 aaPredicted RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 F11RQ9Y624 299 aaKnown RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 RTTNQ86VV8 2226 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 RP1L1Q8IWN7 2480 aaPredicted RBP2.69□□□□□ -1.98
CCDC66-202ENST00000341455 POLQO75417 2590 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 HECTD4Q9Y4D8 3996 aa2.69□□□□□ -1.98
CCDC66-202ENST00000341455 TRAV26-1A0A087WT03 109 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 TRBV7-1A0A0A6YYK4 115 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 I3L2K1 104 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 ATP6V0E1O15342 81 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 SNAPC5O75971 98 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 SERPINE2P07093 398 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 LGALS1P09382 135 aaKnown RBP2.68□□□□□ -1.98
CCDC66-202ENST00000341455 OR5AC1P0C628 307 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 OR9G9P0C7N8 305 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 SULT1A3P0DMM9 295 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 SULT1A4P0DMN0 295 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 CNTFRP26992 372 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 GPX4P36969 197 aaPredicted RBP2.68□□□□□ -1.98
CCDC66-202ENST00000341455 PPP1R1AQ13522 171 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 SLC35E3Q7Z769 313 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 OR2T6Q8NHC8 308 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 SECTM1Q8WVN6 248 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 CAPSLQ8WWF8 208 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 QTRT1Q9BXR0 403 aaKnown RBP2.68□□□□□ -1.98
CCDC66-202ENST00000341455 HIPK2Q9H2X6 1198 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 GEMIN7Q9H840 131 aaKnown RBP2.68□□□□□ -1.98
CCDC66-202ENST00000341455 KCNIP3Q9Y2W7 256 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 HILPDAQ9Y5L2 63 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 TET2Q6N021 2002 aaPredicted RBP2.68□□□□□ -1.98
CCDC66-202ENST00000341455 A0A0G2JRQ6 117 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 A0A1W2PPE3 182 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 MEIS3P1A6NDR6 274 aa2.68□□□□□ -1.98
CCDC66-202ENST00000341455 K7EMT4 169 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms