RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZNF343Q6P1L6 599 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 CFAP161Q6P656 301 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 OR4F5Q8NH21 305 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 PERPQ96FX8 193 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 UHRF2Q96PU4 802 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 OR4F4Q96R69 305 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 CCL19Q99731 98 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 VAX2Q9UIW0 290 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 IGKV1D-37A0A075B6S9 117 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 IGHV4-30-2A0A087WSY4 118 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 SEC14L6B5MCN3 397 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 MPDU1O75352 247 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 CST9LP1Q5W188 147 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 SLC16A13Q7RTY0 426 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 MMD2Q8IY49 270 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 FAM24BQ8N5W8 94 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 OR4A5Q8NH83 315 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 SRSF12Q8WXF0 261 aaKnown RBP5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 URGCP-MRPS24S4R325 110 aa5.89□□□□□ -1.47
SRFBP1-201ENST00000339397 IGHV2-70DA0A0C4DH43 119 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 SH2D7A6NKC9 451 aaPredicted RBP5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 NCBP2LA6PVI3 153 aaKnown RBP5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 LY86O95711 162 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 MOSP00540 346 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 TAGLN2P37802 199 aaKnown RBP5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 RPL29P47914 159 aaKnown RBP5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 RND2P52198 227 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 ATP5J2P56134 94 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 SPNS3Q6ZMD2 512 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 ZNF503Q96F45 646 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 SSX3Q99909 188 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 AMMECR1Q9Y4X0 333 aaPredicted RBP5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 ITPR2Q14571 2701 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 A0A1W2PN81 502 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 CNIH1O95406 144 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 CRYBA1P05813 215 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 OR10J4P0C629 311 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 STAG3L2P0CL84 134 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 STAG3L3P0CL85 134 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 CHRNA7P36544 502 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 NDPQ00604 133 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 ZFP82Q8N141 532 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 MAPK1IP1LQ8NDC0 245 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 OR5T1Q8NG75 326 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 NIPSNAP3BQ9BS92 247 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 SMDT1Q9H4I9 107 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 YTHDF2Q9Y5A9 579 aaKnown RBP5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 C11orf94C9JXX5 98 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 SAA4P35542 130 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 PSMB3P49720 205 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 KRTAP10-9P60411 292 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 PATE2Q6UY27 113 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 RBMS3Q6XE24 437 aaKnown RBP5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 BRD3OSQ6XYD6 125 aa5.88□□□□□ -1.47
SRFBP1-201ENST00000339397 INS-IGF2F8WCM5 200 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 PRB4P10163 310 aaPredicted RBP5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 HABP2Q14520 560 aaPredicted RBP5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 C1orf122Q6ZSJ8 110 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 FAM168AQ92567 244 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 SMIM7Q9BQ49 75 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 WNT10AQ9GZT5 417 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 PARLQ9H300 379 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 UNKLQ9H9P5 680 aaKnown RBP5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 SMCO4Q9NRQ5 59 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 CENPVL3A0A0U1RRI6 287 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 PSMB11A5LHX3 300 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 LINC01548A6NM66 108 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 NBR2O15453 112 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 NDUFB4O95168 129 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 MT-CO2P00403 227 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 RAB31Q13636 194 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 FXYD3Q14802 87 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 ZNF114Q8NC26 417 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 C2CD4CQ8TF44 421 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 CACNG8Q8WXS5 425 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 HIST1H2BAQ96A08 127 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 TVP23CQ96ET8 276 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 SDF2L1Q9HCN8 221 aa5.87□□□□□ -1.47
SRFBP1-201ENST00000339397 TRBV20OR9-2A0A075B6H5 130 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 GCHFRP30047 84 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 GPX4P36969 197 aaPredicted RBP5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 CEACAM3P40198 252 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 PDLIM4P50479 330 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 CX3CL1P78423 397 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 LEMD1Q68G75 181 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 CYP2G1PQ6ZSU1 146 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 SLC35E1Q96K37 410 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 SONP18583 2426 aaKnown RBP5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 NF1P21359 2839 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 SCO2A0A1W2PP80 73 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 OR2C1O95371 312 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 PYYP10082 97 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 ORM2P19652 201 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 HNF1AP20823 631 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 SUB1P53999 127 aaKnown RBP eCLIP5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 RHOBP62745 196 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 PMS2P11Q13670 270 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 CLEC12BQ2HXU8 276 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 C5orf64Q2M2E5 130 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms