RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Armc10Q9D0L7 306 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Tex43Q9D9I1 141 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Herpud1Q9JJK5 391 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr157Q9QZ20 318 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Klk4Q9Z0M1 255 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Sumo3Q9Z172 110 aa17.52■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gm20824A0A087WS97 222 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr1274-psA0A1L1SQ02 309 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Vmn1r224E9PWK2 298 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Foxf1Q61080 378 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 B430306N03RikQ6QX36 289 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr1058Q7TR74 316 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Lmf2Q8C3X8 702 aaKnown RBP17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 WrbQ8K0D7 174 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Q9CQ90 155 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ndufb7Q9CR61 137 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Rnf115Q9D0C1 305 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Coa3Q9D2R6 108 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 ShpkQ9D5J6 476 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Stra6lQ9DBN1 621 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Csmd1Q923L3 3564 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ros1Q78DX7 2340 aa17.51■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Dio1Q61153 257 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Tle4Q62441 773 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Prss35Q8C0F9 409 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 A730015C16RikQ8C992 119 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 LgalslQ8VED9 172 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr355Q8VFP6 310 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Plekhf2Q91WB4 249 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Prr15Q9D1T5 122 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Prr30Q9D9B7 401 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Chst1Q9EQC0 411 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Rab33bO35963 229 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 FblP35550 327 aaKnown RBP17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 CycsP62897 105 aaKnown RBP17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Rgs16P97428 201 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Samt2Q497M0 247 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Rasl2-9Q61820 216 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ypel2Q65Z95 119 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr153Q7TR48 307 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Tacstd2Q8BGV3 317 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Prss41Q920S2 322 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Rab32Q9CZE3 223 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ypel1Q9ESC7 118 aa17.5■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gm9195A0A140LHT4 2805 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Usp9xP70398 2559 aaKnown RBP17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Trav5-4A0A075B652 114 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ankrd66J3QNN4 192 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 P10404 641 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 NfyaP23708 346 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Rpl31P62900 125 aaKnown RBP17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Jagn1Q5XKN4 183 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Scarb1Q61009 509 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr1031Q7TR87 336 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Odf4Q8VI88 290 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Slc22a26Q91WJ2 552 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Dmbx1Q91ZK4 381 aa17.49■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 1700025B11RikA0A087WNZ6 93 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ighv6-5A0A0A6YWS9 119 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr1150-ps1A0A1L1STL1 316 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gm1330D3Z460 184 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Cryba1P02525 198 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gm5615Q3UW02 101 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Zfp85Q7TMC9 473 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Mef2cQ8CFN5 474 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Cldn23Q9D7D7 296 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Abhd5Q9DBL9 351 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Myoz1Q9JK37 296 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ncoa6Q9JL19 2067 aa17.48■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 4933408B17RikG3X9B4 273 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Lin7cO88952 197 aaKnown RBP17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Slc6a9P28571 692 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Tmem52bQ0VBF2 186 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 SspnQ62147 216 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Tgfbr2Q62312 592 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Cstl1Q80Y72 140 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Magt1Q9CQY5 335 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Lysmd2Q9D7V2 215 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gng12Q9DAS9 72 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 PkdrejQ9Z0T6 2126 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr753-ps1A0A140LHN3 164 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Zfp982A2A8Q4 368 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Vmn1r180B9EK86 305 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gm21719J3KMI9 230 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr467L7N455 308 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 RrasP10833 218 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 PjvkQ0ZLH2 352 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gfod1Q3UHD2 390 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Prima1Q810F0 153 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 PigmQ8C2R7 423 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Inpp5kQ8C5L6 468 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 TprkbQ8QZZ7 175 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr76Q8VFV2 317 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr957Q9EQB7 311 aa17.47■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr427E9Q7E7 315 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Gm21970F6XX07 295 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Olfr906K7N5P3 311 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 P04940 107 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 P04941 107 aa17.46■□□□□ 0.39
Ccdc88a-202ENSMUST00000109477 Ercc1P07903 298 aa17.46■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms