RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SMIM4Q8WVI0 70 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 MRGPRFQ96AM1 343 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 RRNAD1Q96FB5 475 aaKnown RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 SEC22AQ96IW7 307 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 SCGB3A2Q96PL1 93 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 PRRT1Q99946 306 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 TUBA4BQ9H853 241 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 PLEKHA3Q9HB20 300 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 ENY2Q9NPA8 101 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 ZC4H2Q9NQZ6 224 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 MCUBQ9NWR8 336 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 GAR1Q9NY12 217 aaKnown RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 SLC2A8Q9NY64 477 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 TECRQ9NZ01 308 aaKnown RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 NDUFA13Q9P0J0 144 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 SCP2D1Q9UJQ7 156 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 UFC1Q9Y3C8 167 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 F11RQ9Y624 299 aaKnown RBP4.86□□□□□ -1.63
TCF4-249ENST00000625716 U3KQK5 164 aa4.86□□□□□ -1.63
TCF4-249ENST00000625716 MFSD2BA6NFX1 497 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 OR2T8A6NH00 312 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 C2orf70A6NJV1 201 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 ZNF561-AS1K7EIQ3 104 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 ZNF701M0R085 212 aaPredicted RBP4.85□□□□□ -1.63
TCF4-249ENST00000625716 GSTZ1O43708 216 aaPredicted RBP4.85□□□□□ -1.63
TCF4-249ENST00000625716 IFNA17P01571 189 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 FRMD6-AS1P0C7T7 363 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 FOLR2P14207 255 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 TNFSF8P32971 234 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 FAUP35544 74 aaKnown RBP4.85□□□□□ -1.63
TCF4-249ENST00000625716 SNCAP37840 140 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 SUB1P53999 127 aaKnown RBP eCLIP4.85□□□□□ -1.63
TCF4-249ENST00000625716 AP3S2P59780 193 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 PRCDQ00LT1 54 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 DHODHQ02127 395 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 FHL2Q14192 279 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 GUCA2BQ16661 112 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 KLK9Q2XQG4 91 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 SP6Q3SY56 376 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 TM4SF20Q53R12 229 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 PYDC2Q56P42 97 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 C11orf87Q6NUJ2 197 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 FAAP20Q6NZ36 180 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 SLC35G3Q8N808 338 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 OR1P1Q8NH06 330 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 IL17DQ8TAD2 202 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 ZNF502Q8TBZ5 544 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 BSCL2Q96G97 398 aaPredicted RBP4.85□□□□□ -1.63
TCF4-249ENST00000625716 TP53RKQ96S44 253 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 TMEM14BQ9NUH8 114 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 C21orf62Q9NYP8 219 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 KLK9Q9UKQ9 250 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 KCNIP3Q9Y2W7 256 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 CEPT1Q9Y6K0 416 aa4.85□□□□□ -1.63
TCF4-249ENST00000625716 IGHV3-21A0A0B4J1V1 117 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 IGHV3-35A0A0C4DH35 117 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 ANKRD20A5PA0PJZ0 165 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 TGOLN2O43493 480 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 SCGB2A1O75556 95 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 IGKV1-39P01597 117 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 IGKV1D-39P04432 117 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 IGHV4-30-4P0DP06 118 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 CBLN1P23435 193 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 HOXA1P49639 335 aaPredicted RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 MFAP4P55083 255 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 ELLP55199 621 aaPredicted RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 CD81P60033 236 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 RELQ04864 619 aaPredicted RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 DEFB114Q30KQ6 69 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 CD300EQ496F6 205 aaPredicted RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 ZNF57Q68EA5 555 aaPredicted RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 RBPMS2Q6ZRY4 209 aaKnown RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 SLC16A13Q7RTY0 426 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 OR2C3Q8N628 320 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 UXS1Q8NBZ7 420 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 OR51S1Q8NGJ8 323 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 OR4C16Q8NGL9 310 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 SCARB1Q8WTV0 552 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 MARC2Q969Z3 335 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 PINX1Q96BK5 328 aaKnown RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 ATP6V0BQ99437 205 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 THAP7Q9BT49 309 aaPredicted RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 SLIRPQ9GZT3 109 aaKnown RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 NXF2Q9GZY0 626 aaKnown RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 TMEM222Q9H0R3 208 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 NAA60Q9H7X0 242 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 MRPL27Q9P0M9 148 aaKnown RBP4.84□□□□□ -1.63
TCF4-249ENST00000625716 DMRT1Q9Y5R6 373 aa4.84□□□□□ -1.63
TCF4-249ENST00000625716 PRKDCP78527 4128 aaKnown RBP4.83□□□□□ -1.64
TCF4-249ENST00000625716 A0A0B4J293 547 aa4.83□□□□□ -1.64
TCF4-249ENST00000625716 PIGBOS1A0A0B4J2F0 54 aa4.83□□□□□ -1.64
TCF4-249ENST00000625716 IZUMO1RA6ND01 250 aa4.83□□□□□ -1.64
TCF4-249ENST00000625716 A8MWP6 167 aa4.83□□□□□ -1.64
TCF4-249ENST00000625716 A8MZ25 164 aa4.83□□□□□ -1.64
TCF4-249ENST00000625716 CORTO00230 105 aa4.83□□□□□ -1.64
TCF4-249ENST00000625716 NDUFA4O00483 81 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms