RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GGTLC1Q9BX51 225 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 AICDAQ9GZX7 198 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 CA10Q9NS85 328 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 MRPS16Q9Y3D3 137 aaKnown RBP2.34□□□□□ -2.03
BRCA1-229ENST00000621897 RALGAPA2Q2PPJ7 1873 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 CDK5RAP2Q96SN8 1893 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF638Q14966 1978 aaKnown RBP2.34□□□□□ -2.04
BRCA1-229ENST00000621897 MYOM3Q5VTT5 1437 aa2.34□□□□□ -2.04
BRCA1-229ENST00000621897 DENND4CQ5VZ89 1909 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 LOXHD1Q8IVV2 1947 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 LOC102724200A0A096LPH7 203 aaPredicted RBP2.33□□□□□ -2.04
BRCA1-229ENST00000621897 A0A1B0GW54 56 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 DHRS12A0PJE2 317 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 TLCD2A6NGC4 264 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 J3QR89 54 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 RBFOX2O43251 390 aaKnown RBP eCLIP2.33□□□□□ -2.04
BRCA1-229ENST00000621897 APODP05090 189 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 FKBP2P26885 142 aaKnown RBP2.33□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF136P52737 540 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 RTL8BQ17RB0 113 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 VMA21Q3ZAQ7 101 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 MPV17L2Q567V2 206 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 SLC25A34Q6PIV7 304 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM14EPQ6UXP3 125 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 IFT20Q8IY31 132 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF645Q8N7E2 425 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 ZDHHC22Q8N966 263 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 OR11G2Q8NGC1 345 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 SFT2D1Q8WV19 159 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 BORCS8Q96FH0 119 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 TEX37Q96LM6 180 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 DERL3Q96Q80 235 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 TRIB3Q96RU7 358 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 PCTPQ9UKL6 214 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 TSPOAP1O95153 1857 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 FER1L6Q2WGJ9 1857 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 ABCC10Q5T3U5 1492 aa2.33□□□□□ -2.04
BRCA1-229ENST00000621897 ATG2AQ2TAZ0 1938 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TRAV30A0A087WSZ9 112 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV3-72A0A0B4J1Y9 119 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TRAV41A0A0B4J266 112 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV1OR15-9A0A0B4J2B8 117 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TRBV7-6A0A0J9YX20 115 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 IRGMA1A4Y4 181 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 MEIS3P1A6NDR6 274 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM212A6NML5 194 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 IFITM5A6NNB3 132 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 GABARAPH6UMI1 98 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 UBE2L6O14933 153 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 PGLYRP1O75594 196 aaPredicted RBP2.32□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV3-11P01762 117 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 HLA-DQB1P01920 261 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TRGC2P03986 189 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
BRCA1-229ENST00000621897 CD7P09564 240 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 HLA-EP13747 358 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 NTF3P20783 257 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 GNG4P50150 75 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 RAB5CP51148 216 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 FGF12P61328 243 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 ATP5G2Q06055 141 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM183BQ1AE95 376 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 RRN3P1Q2M238 152 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 C1orf140Q5VVS0 124 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 MORN3Q6PF18 240 aaPredicted RBP2.32□□□□□ -2.04
BRCA1-229ENST00000621897 LCA10Q71F78 164 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 MSRB3Q8IXL7 192 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM183AQ8IXX5 376 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF709Q8N972 641 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 OR4S1Q8NGB4 309 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 OR4K5Q8NGD3 323 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 OR5A2Q8NGI9 324 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 OR51A4Q8NGJ6 313 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 FNDC9Q8TBE3 224 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 RAB2BQ8WUD1 216 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 MAGOHBQ96A72 148 aaKnown RBP2.32□□□□□ -2.04
BRCA1-229ENST00000621897 CAMK2N2Q96S95 79 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 PEBP4Q96S96 227 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 MGLLQ99685 303 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 CHAC1Q9BUX1 264 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TUBA4BQ9H853 241 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 SND1-IT1Q9HBX3 110 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TRIOBPQ9H2D6 2365 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 NLRC5Q86WI3 1866 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 ANKRD31Q8N7Z5 1873 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 NCKAP5O14513 1909 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 COL1A2P08123 1366 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 CARMIL3Q8ND23 1372 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TROQ12816 1431 aaPredicted RBP2.32□□□□□ -2.04
BRCA1-229ENST00000621897 NAIPQ13075 1403 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 NCAPD3P42695 1498 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 MBD5Q9P267 1494 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 ZFYVE16Q7Z3T8 1539 aa2.32□□□□□ -2.04
BRCA1-229ENST00000621897 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.31□□□□□ -2.04
BRCA1-229ENST00000621897 NUP210LQ5VU65 1888 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 DOCK4Q8N1I0 1966 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV3OR15-7A0A075B7D8 119 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV3-66A0A0C4DH42 116 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms