RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CRYGBP07316 175 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 RNASE2P10153 161 aaKnown RBP10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 SAA4P35542 130 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 RPL27AP46776 148 aaKnown RBP10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 MLANAQ16655 118 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 MIC13Q5XKP0 118 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 GGACTQ9BVM4 153 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 CELSR2Q9HCU4 2923 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 ABCA2Q9BZC7 2435 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 COLCA2A8K830 154 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 FCN1O00602 326 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 C2orf83Q53S99 150 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 EAF1Q96JC9 268 aaPredicted RBP10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 SMCO4Q9NRQ5 59 aa10.16□□□□□ -0.78
TNFAIP3-209ENST00000619035 POLQO75417 2590 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 CTXND1A0A1B0GTU2 59 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 NBR2O15453 112 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 YIF1AO95070 293 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 MAS1LP35410 378 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 PAX8Q06710 450 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 BSXQ3C1V8 233 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 GGTLC1Q9BX51 225 aa10.15□□□□□ -0.78
TNFAIP3-209ENST00000619035 NAV3Q8IVL0 2385 aa10.15□□□□□ -0.79
TNFAIP3-209ENST00000619035 CNIH1O95406 144 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 FAM90A2PQ658T7 463 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 OR2T10Q8NGZ9 312 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 MALSU1Q96EH3 234 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 ACTR3CQ9C0K3 210 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 NPVFQ9HCQ7 196 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 PXMP4Q9Y6I8 212 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 NCBP2LA6PVI3 153 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 NPFFO15130 113 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 CRYBA1P05813 215 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 AREGP15514 252 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 CDC34P49427 236 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 CD81P60033 236 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 SMUG1Q53HV7 270 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 RUSC1-AS1Q66K80 236 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 C19orf35Q6ZS72 473 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 ZFP82Q8N141 532 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 P2RX4Q99571 388 aa10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 ANKRD17O75179 2603 aaKnown RBP10.14□□□□□ -0.79
TNFAIP3-209ENST00000619035 ZFHX3Q15911 3703 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 IGLC7A0M8Q6 106 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 MBP02144 154 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 MSMBP08118 114 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 GATA3P23771 443 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 SUB1P53999 127 aaKnown RBP eCLIP10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 ACOT6Q3I5F7 207 aaPredicted RBP10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 MRPL41Q8IXM3 137 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 SRSF12Q8WXF0 261 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 SOX15O60248 233 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 MPDU1O75352 247 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 IGHV3-48P01763 117 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 TMEM11P17152 192 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 OPRK1P41145 380 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 FAM24BQ8N5W8 94 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 PSMG3-AS1Q96PY0 264 aa10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
TNFAIP3-209ENST00000619035 B4DSR2 109 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 CYB5BO43169 146 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 PAGE4O60829 102 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 GATA2P23769 480 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 UBE2G2P60604 165 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 RHEBQ15382 184 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 FAM120AOSQ5T036 256 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 SPATA31B1PQ5VZV4 182 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 HIST2H2BCQ6DN03 193 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 BRD3OSQ6XYD6 125 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 MAPK1IP1LQ8NDC0 245 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 C2CD4CQ8TF44 421 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 ABHD5Q8WTS1 349 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 MBD6Q96DN6 1003 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 ACY3Q96HD9 319 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 AJUBAQ96IF1 538 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 NIPSNAP3BQ9BS92 247 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 PTPN13Q12923 2485 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 TEX22C9J3V5 150 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 CD69Q07108 199 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 KIAA0141Q14154 515 aaPredicted RBP10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 EBI3Q14213 229 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 GAMTQ14353 236 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 DEFB113Q30KQ7 82 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 SLC16A13Q7RTY0 426 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 NPBQ8NG41 125 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms