RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 GATAD1Q8WUU5 269 aa11.73□□□□□ -0.53
ERCC1-206ENST00000588300 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
ERCC1-206ENST00000588300 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
ERCC1-206ENST00000588300 APOA1P02647 267 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 CD5P06127 495 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 RCVRNP35243 200 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 ERHP84090 104 aaKnown RBP11.72□□□□□ -0.53
ERCC1-206ENST00000588300 SNX29P2Q8IUI4 249 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 PHLDA1Q8WV24 401 aaPredicted RBP11.72□□□□□ -0.53
ERCC1-206ENST00000588300 MRGPRFQ96AM1 343 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 RARRES2Q99969 163 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 COMMD3Q9UBI1 195 aa11.72□□□□□ -0.53
ERCC1-206ENST00000588300 IGHV3OR16-13A0A075B7E8 117 aa11.71□□□□□ -0.53
ERCC1-206ENST00000588300 IGHV3-74A0A0B4J1X5 117 aa11.71□□□□□ -0.53
ERCC1-206ENST00000588300 IGHV3-48P01763 117 aa11.71□□□□□ -0.53
ERCC1-206ENST00000588300 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
ERCC1-206ENST00000588300 TCF24Q7RTU0 167 aa11.71□□□□□ -0.53
ERCC1-206ENST00000588300 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
ERCC1-206ENST00000588300 A0A087WXM4 84 aa11.7□□□□□ -0.54
ERCC1-206ENST00000588300 NPBWR1P48145 328 aa11.7□□□□□ -0.54
ERCC1-206ENST00000588300 TOMM20LQ6UXN7 152 aa11.7□□□□□ -0.54
ERCC1-206ENST00000588300 DUSP18Q8NEJ0 188 aa11.7□□□□□ -0.54
ERCC1-206ENST00000588300 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 SNCAP37840 140 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 SLC35G3Q8N808 338 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 ST8SIA2Q92186 375 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 MFFQ9GZY8 342 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 C11orf68Q9H3H3 251 aaKnown RBP11.69□□□□□ -0.54
ERCC1-206ENST00000588300 VSIRQ9H7M9 311 aa11.69□□□□□ -0.54
ERCC1-206ENST00000588300 M0QYG6 137 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 DNASE2O00115 360 aaPredicted RBP11.68□□□□□ -0.54
ERCC1-206ENST00000588300 CA1P00915 261 aaPredicted RBP11.68□□□□□ -0.54
ERCC1-206ENST00000588300 PGAM2P15259 253 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 AKR1C2P52895 323 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 RND3P61587 244 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 IZUMO4Q1ZYL8 232 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 LGALS9CQ6DKI2 356 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 RPP25LQ8N5L8 163 aaKnown RBP11.68□□□□□ -0.54
ERCC1-206ENST00000588300 C11orf45Q8TAV5 145 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 ZNF486Q96H40 463 aaPredicted RBP11.68□□□□□ -0.54
ERCC1-206ENST00000588300 MS4A6AQ9H2W1 248 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 TMEM231Q9H6L2 316 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
ERCC1-206ENST00000588300 FRAS1Q86XX4 4008 aa11.68□□□□□ -0.54
ERCC1-206ENST00000588300 KMT2AQ03164 3969 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 INS-IGF2F8WCM5 200 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 DFFBO76075 338 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 ATG12O94817 140 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 TNFAIP8O95379 198 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
ERCC1-206ENST00000588300 ELK1P19419 428 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 NANOS2P60321 138 aaKnown RBP11.67□□□□□ -0.54
ERCC1-206ENST00000588300 NCS1P62166 190 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 RPL11P62913 178 aaKnown RBP11.67□□□□□ -0.54
ERCC1-206ENST00000588300 RBMS2Q15434 407 aaKnown RBP11.67□□□□□ -0.54
ERCC1-206ENST00000588300 PDCD10Q9BUL8 212 aa11.67□□□□□ -0.54
ERCC1-206ENST00000588300 IGHV3-66A0A0C4DH42 116 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 CORTO00230 105 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 HPGDSO60760 199 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 IFNA17P01571 189 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 IGKV1-5P01602 117 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 IFNA4P05014 189 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 SUB1P53999 127 aaKnown RBP eCLIP11.66□□□□□ -0.54
ERCC1-206ENST00000588300 PIGPP57054 158 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 DEFB131AP59861 70 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 VBP1P61758 197 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 TMEM187Q14656 261 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 RNASE10Q5GAN6 216 aaKnown RBP11.66□□□□□ -0.54
ERCC1-206ENST00000588300 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 FUNDC2Q9BWH2 189 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 FBXL17Q9UF56 701 aa11.66□□□□□ -0.54
ERCC1-206ENST00000588300 A0A0B4J293 547 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 FAM25AB3EWG3 89 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 FAM25CB3EWG5 89 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 FAM25GB3EWG6 89 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 DEDDO75618 318 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 TMEM50AO95807 157 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 P0C879 139 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 PI3P19957 117 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
ERCC1-206ENST00000588300 RNASE12Q5GAN4 147 aaKnown RBP11.65□□□□□ -0.54
ERCC1-206ENST00000588300 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 LHFPL1Q86WI0 220 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 LILRB2Q8N423 598 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 ARRDC1Q8N5I2 433 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
ERCC1-206ENST00000588300 DNAH10Q8IVF4 4471 aa11.64□□□□□ -0.55
ERCC1-206ENST00000588300 C3orf85A0A1B0GTC6 90 aa11.64□□□□□ -0.55
ERCC1-206ENST00000588300 A0A1B0GU03 582 aa11.64□□□□□ -0.55
ERCC1-206ENST00000588300 A0A1W2PS18 150 aa11.64□□□□□ -0.55
ERCC1-206ENST00000588300 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
ERCC1-206ENST00000588300 RNASE2P10153 161 aaKnown RBP11.64□□□□□ -0.55
ERCC1-206ENST00000588300 NPPCP23582 126 aa11.64□□□□□ -0.55
ERCC1-206ENST00000588300 RORCP51449 518 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms