RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 H3BUX3 64 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 CD5LO43866 347 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 PRH1P02810 166 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 CRYGCP07315 174 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 NMBP08949 121 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 DEFA4P12838 97 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 MDKP21741 143 aaPredicted RBP8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 FGF7P21781 194 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 DEFB112Q30KQ8 113 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 AKR1C8PQ5T2L2 129 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 TET2Q6N021 2002 aaPredicted RBP8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 TEPPQ6URK8 271 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 DPPA3Q6W0C5 159 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 TMEM144Q7Z5S9 345 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 CIARTQ8N365 385 aaPredicted RBP8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 TTC9CQ8N5M4 171 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 C5orf56Q8N8D9 126 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 SLC35E1Q96K37 410 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 WNT10AQ9GZT5 417 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 PRDM13Q9H4Q3 707 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 MED9Q9NWA0 146 aa8.33□□□□□ -1.08
CHMP1B-202ENST00000588284 IGHV7-81A0A0B4J1V7 117 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 NPIPB5A8MRT5 1133 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 ZNF705EA8MWA4 302 aaPredicted RBP8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 NUDT19A8MXV4 375 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 WIPF1O43516 503 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 AREGP15514 252 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 HIST1H1BP16401 226 aaKnown RBP8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 CTRB1P17538 263 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 SSBP2P81877 361 aaPredicted RBP8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 TNP2Q05952 138 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 FAM74A1Q5RGS3 127 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 CTRB2Q6GPI1 263 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 SGMS2Q8NHU3 365 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 C22orf15Q8WYQ4 148 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 THYN1Q9P016 225 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 PFDN2Q9UHV9 154 aa8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 PRRC2AP48634 2157 aaKnown RBP8.32□□□□□ -1.08
CHMP1B-202ENST00000588284 CR1P17927 2039 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 TEX46H3BTG2 121 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 REG1AP05451 166 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 HNF1AP20823 631 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 SRP14P37108 136 aaKnown RBP8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 OPRK1P41145 380 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 IER3P46695 156 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 CAMLGP49069 296 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 RAB2AP61019 212 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 RUNX1Q01196 453 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 AKR1C1Q04828 323 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 SCGB2A2Q13296 93 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 GAMTQ14353 236 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 AKIRIN2Q53H80 203 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 Q6YL49 198 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 TMEM182Q6ZP80 229 aaPredicted RBP8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 SLC16A13Q7RTY0 426 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 BCL6BQ8N143 479 aaPredicted RBP8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 MISP3Q96FF7 219 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 SH3BGRL3Q9H299 93 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 PARP11Q9NR21 331 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 SOX21Q9Y651 276 aaPredicted RBP8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 TNCP24821 2201 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 ABCA2Q9BZC7 2435 aa8.31□□□□□ -1.08
CHMP1B-202ENST00000588284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 ZFHX3Q15911 3703 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 CD33P20138 364 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 RPL29P47914 159 aaKnown RBP8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 RIPPLY3P57055 190 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 LY6EQ16553 131 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 ACOT6Q3I5F7 207 aaPredicted RBP8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 FBLN7Q53RD9 439 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 UNQ5815/PRO19632Q6UWF5 114 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 SPNS3Q6ZMD2 512 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 TMEM219Q86XT9 240 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 LFNGQ8NES3 379 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 RSG1Q9BU20 258 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 NPCDR1Q9BY65 106 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 LSM4Q9Y4Z0 139 aaKnown RBP8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 F8P00451 2351 aa8.3□□□□□ -1.08
CHMP1B-202ENST00000588284 TSPAN15O95858 294 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 HBE1P02100 147 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 APELAP0DMC3 54 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 EGR2P11161 476 aaPredicted RBP8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 CRIP2P52943 208 aaPredicted RBP8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 SELENOTP62341 195 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 MLANAQ16655 118 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 KLK9Q2XQG4 91 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 TMEM41BQ5BJD5 291 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 RBMS3Q6XE24 437 aaKnown RBP8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 Q6ZRG5 221 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 SLC7A5P1Q8MH63 180 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 COMMD1Q8N668 190 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 FAM110DQ8TAY7 271 aaPredicted RBP8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 FAM213BQ8TBF2 198 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 FAM103A1Q9BTL3 118 aaKnown RBP8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 TMEM160Q9NX00 188 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 KLK9Q9UKQ9 250 aa8.29□□□□□ -1.08
CHMP1B-202ENST00000588284 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
CHMP1B-202ENST00000588284 TRAV30A0A087WSZ9 112 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms