RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 DEDDO75618 318 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 APELAP0DMC3 54 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 PF4V1P10720 104 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 FCGR2BP31994 310 aaPredicted RBP8.09□□□□□ -1.11
CCDC47-203ENST00000580986 RHOGP84095 191 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 FGL1Q08830 312 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 RAB32Q13637 225 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 C10orf99Q6UWK7 81 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 NDUFA11Q86Y39 141 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 ZNF491Q8N8L2 437 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 DMRT1Q9Y5R6 373 aa8.09□□□□□ -1.11
CCDC47-203ENST00000580986 COL6A5A8TX70 2615 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 C15orf62A8K5M9 175 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 SSSCA1O60232 199 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 NXPH3O95157 252 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 SIX6O95475 246 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 MPC2O95563 127 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 SCGB1D2O95969 90 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 IFNA10P01566 189 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 TRGV3P03979 118 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 RLN2P04090 185 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 RPLP1P05386 114 aaKnown RBP8.08□□□□□ -1.12
CCDC47-203ENST00000580986 REG1AP05451 166 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 LYL1P12980 280 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 MFAP2P55001 183 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 PAX9P55771 341 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 TPPP2P59282 170 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 RAB11AP62491 216 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 RPL23AP62750 156 aaKnown RBP8.08□□□□□ -1.12
CCDC47-203ENST00000580986 SPINK9Q5DT21 86 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 C12orf54Q6X4T0 127 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 C4orf3Q8WVX3 66 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 CACNG8Q8WXS5 425 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 KLK15Q9H2R5 256 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 LYRM2Q9NU23 88 aaPredicted RBP8.08□□□□□ -1.12
CCDC47-203ENST00000580986 STRAPQ9Y3F4 350 aaKnown RBP8.08□□□□□ -1.12
CCDC47-203ENST00000580986 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
CCDC47-203ENST00000580986 TRBV7-1A0A0A6YYK4 115 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 RPS10-NUDT3A0A1W2PQS6 291 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-203ENST00000580986 E5RGE8 158 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 FNDC10F2Z333 226 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 I3L2K1 104 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 K7EIM0 57 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 L7N2F9 121 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 TMEM50AO95807 157 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 CD28P10747 220 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 SLC25A4P12235 298 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 KRTAP10-3P60369 221 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 VAMP2P63027 116 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 C15orf32Q32M92 178 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 ETFRF1Q6IPR1 90 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 ZNF343Q6P1L6 599 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 PRSS54Q6PEW0 395 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 TMEM14EPQ6UXP3 125 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 TMEM170AQ8WVE7 144 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 TXN2Q99757 166 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 CITED2Q99967 270 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-203ENST00000580986 MAGT1Q9H0U3 335 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 ZNF355PQ9NSJ1 428 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 GAR1Q9NY12 217 aaKnown RBP8.07□□□□□ -1.12
CCDC47-203ENST00000580986 PSENENQ9NZ42 101 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 FBXL7Q9UJT9 491 aa8.07□□□□□ -1.12
CCDC47-203ENST00000580986 TCRBV4S1A1TA0A5B7 111 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 ADARB2-AS1A8MUL3 147 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 PRSS46E5RG02 174 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 I3L521 148 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 OR2J3O76001 311 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 PRH1P02810 166 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 LGALS1P09382 135 aaKnown RBP8.06□□□□□ -1.12
CCDC47-203ENST00000580986 OR8U8P0C7N1 319 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 IAPPP10997 89 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 GPX4P36969 197 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-203ENST00000580986 P2RY1P47900 373 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 S100A10P60903 97 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 ATP5G2Q06055 141 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 SPANXN5Q5MJ07 72 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 SLC25A24Q6NUK1 477 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 C3orf56Q8N813 242 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 SPATA3Q8NHX4 192 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 EEF1AKMT3Q96AZ1 226 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 MDFIQ99750 246 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 RNF126Q9BV68 326 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 GGACTQ9BVM4 153 aa8.06□□□□□ -1.12
CCDC47-203ENST00000580986 LSM5Q9Y4Y9 91 aaKnown RBP8.06□□□□□ -1.12
CCDC47-203ENST00000580986 PMS2P5A8MQ11 134 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 H0YIZ8 118 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 NDUFB8O95169 186 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 MT-CO2P00403 227 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 CD33P20138 364 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 OPRK1P41145 380 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 BCAP31P51572 246 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 CD69Q07108 199 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 BAXQ07812 192 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 C11orf87Q6NUJ2 197 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 SPSB3Q6PJ21 355 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 C19orf35Q6ZS72 473 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms