RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 S4R3C0 116 aa9.74□□□□□ -0.85
CCDC57-211ENST00000578187 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 LINC00854A0A1B0GVQ3 168 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 DUXBA0A1W2PPF3 345 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 CENPXA8MT69 81 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 LCE2BO14633 110 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 PLA2G10O15496 165 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 GGCTO75223 188 aaKnown RBP9.73□□□□□ -0.85
CCDC57-211ENST00000578187 IFNA17P01571 189 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 FRMD6-AS1P0C7T7 363 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 SYNJ2BPP57105 145 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 ERHP84090 104 aaKnown RBP9.73□□□□□ -0.85
CCDC57-211ENST00000578187 PPP1R1AQ13522 171 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 SLC25A24Q6NUK1 477 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 CLEC19AQ6UXS0 136 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 LRTM2Q8N967 370 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 OR9G4Q8NGQ1 327 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 OR52E5Q8NH55 327 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 RCHY1Q96PM5 261 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.73□□□□□ -0.85
CCDC57-211ENST00000578187 CACNG5Q9UF02 275 aa9.73□□□□□ -0.85
CCDC57-211ENST00000578187 K7EIM0 57 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 LYRM1O43325 122 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 SFT2D2O95562 160 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 VAMP1P23763 118 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 ARL3P36405 182 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 HOXA1P49639 335 aaPredicted RBP9.72□□□□□ -0.85
CCDC57-211ENST00000578187 SPCS3P61009 180 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 IL34Q6ZMJ4 242 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 LYZL2Q7Z4W2 148 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 SBSPONQ8IVN8 264 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 SCARB1Q8WTV0 552 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 ATP6V0BQ99437 205 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 PALMDQ9NP74 551 aa9.72□□□□□ -0.85
CCDC57-211ENST00000578187 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
CCDC57-211ENST00000578187 I3L2K1 104 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 SULT1A3P0DMM9 295 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 SULT1A4P0DMN0 295 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 GPR183P32249 361 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 BSXQ3C1V8 233 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 ANKRD55Q3KP44 614 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 GTSCR1Q86UQ5 136 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 GPHB5Q86YW7 130 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 MUC7Q8TAX7 377 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.86
CCDC57-211ENST00000578187 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 SIGLEC8Q9NYZ4 499 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 PEMTQ9UBM1 199 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 CACFD1Q9UGQ2 172 aa9.71□□□□□ -0.86
CCDC57-211ENST00000578187 LGALS9O00182 355 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 TGOLN2O43493 480 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 IGLV1-51P01701 117 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 HLA-AP01891 365 aaKnown RBP9.7□□□□□ -0.86
CCDC57-211ENST00000578187 CLEC3BP05452 202 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
CCDC57-211ENST00000578187 SMCO1Q147U7 214 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 BSCL2Q96G97 398 aaPredicted RBP9.7□□□□□ -0.86
CCDC57-211ENST00000578187 ENY2Q9NPA8 101 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 FLVCR2Q9UPI3 526 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 SORL1Q92673 2214 aa9.7□□□□□ -0.86
CCDC57-211ENST00000578187 IGHV3-21A0A0B4J1V1 117 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 A8MWP6 167 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 CORTO00230 105 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 OR2C1O95371 312 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 MT-CO2P00403 227 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 CSN3P07498 182 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 SLC25A6P12236 298 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 FCGR2BP31994 310 aaPredicted RBP9.69□□□□□ -0.86
CCDC57-211ENST00000578187 SNCAP37840 140 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 TNFRSF9Q07011 255 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 ZNF846Q147U1 533 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 LCN12Q6JVE5 192 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 MISP3Q96FF7 219 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 C20orf85Q9H1P6 137 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 HSPB7Q9UBY9 170 aa9.69□□□□□ -0.86
CCDC57-211ENST00000578187 TENM3Q9P273 2699 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 A0A1B0GU03 582 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 OR2T8A6NH00 312 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 PITX3O75364 302 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 OR4E1P0C645 316 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 IGHV4-30-4P0DP06 118 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 LYL1P12980 280 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 ANXA7P20073 488 aaKnown RBP9.68□□□□□ -0.86
CCDC57-211ENST00000578187 HTR2BP41595 481 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 SUB1P53999 127 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC57-211ENST00000578187 DHRS2Q13268 280 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 SPSB3Q6PJ21 355 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 PLET1Q6UQ28 207 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 ADAMTSL5Q6ZMM2 481 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 HAPLN4Q86UW8 402 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 ZNF436Q9C0F3 470 aaPredicted RBP9.68□□□□□ -0.86
CCDC57-211ENST00000578187 ZC4H2Q9NQZ6 224 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 GAR1Q9NY12 217 aaKnown RBP9.68□□□□□ -0.86
CCDC57-211ENST00000578187 TBC1D24Q9ULP9 559 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 TMED3Q9Y3Q3 217 aa9.68□□□□□ -0.86
CCDC57-211ENST00000578187 TMEM213A2RRL7 107 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms