RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 S100A11P31949 105 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 LPAR6P43657 344 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 KLF3P57682 345 aaPredicted RBP3.04□□□□□ -1.92
CHD9-220ENST00000569794 DNAJB13P59910 316 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 RPS11P62280 158 aaKnown RBP eCLIP3.04□□□□□ -1.92
CHD9-220ENST00000569794 C2orf83Q53S99 150 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 AADACL3Q5VUY0 350 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 RPL22L1Q6P5R6 122 aaKnown RBP3.04□□□□□ -1.92
CHD9-220ENST00000569794 PRSS54Q6PEW0 395 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 MIR7-3HGQ8N6C7 128 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 ZFP62Q8NB50 900 aaPredicted RBP3.04□□□□□ -1.92
CHD9-220ENST00000569794 OR5C1Q8NGR4 320 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 RNASE6Q93091 150 aaKnown RBP3.04□□□□□ -1.92
CHD9-220ENST00000569794 OR2H1Q9GZK4 316 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 TP73-AS1Q9UF72 201 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 SNX12Q9UMY4 172 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 FUT9Q9Y231 359 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 MED31Q9Y3C7 131 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 U3KQ87 197 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 CEP152O94986 1710 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 THSD7AQ9UPZ6 1657 aa3.04□□□□□ -1.92
CHD9-220ENST00000569794 A2MP01023 1474 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 SSH2Q76I76 1423 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 LOC102725191A0A1B0GVB3 256 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 A0A1B0GW54 56 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 ATP6V1G2-DDX39BF2Z307 99 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 SLC25A20O43772 301 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 IGKV1D-33P01593 117 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 IGKV1-33P01594 117 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 PRM2P04554 102 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 CGB3P0DN86 165 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 CGB7P0DN87 165 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 BCL2P10415 239 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 NTF3P20783 257 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 NFYBP25208 207 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 S100PP25815 95 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 S100A4P26447 101 aaKnown RBP3.03□□□□□ -1.92
CHD9-220ENST00000569794 CRYBB3P26998 211 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 CD200P41217 278 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 CCR2P41597 374 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 CCL20P78556 96 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 RTL8BQ17RB0 113 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 DEFB116Q30KQ4 102 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 MRPL51Q4U2R6 128 aaKnown RBP3.03□□□□□ -1.92
CHD9-220ENST00000569794 DNLZQ5SXM8 178 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 LCA10Q71F78 164 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 OR8I2Q8N0Y5 310 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 CYB561D1Q8N8Q1 229 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 OR13C4Q8NGS5 318 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 BORCS8Q96FH0 119 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 MGLLQ99685 303 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 RTL8AQ9BWD3 113 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 SMIM3Q9BZL3 60 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 IL36BQ9NZH7 164 aa3.03□□□□□ -1.92
CHD9-220ENST00000569794 FMN1Q68DA7 1419 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 IGKV1D-43A0A0B4J1Z2 117 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 TRAV38-1A0A0B4J264 116 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 GGT3PA6NGU5 568 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 A8MWP4 228 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 C9JAW5 83 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 M0R2Z0 102 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 DLEU1O43261 78 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 ZNF73O43830 326 aaPredicted RBP3.02□□□□□ -1.93
CHD9-220ENST00000569794 TNFSF15O95150 251 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 IGKV1-5P01602 117 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 TSPEAR-AS2P59090 65 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 HIST1H1AQ02539 215 aaPredicted RBP3.02□□□□□ -1.93
CHD9-220ENST00000569794 OR8G1Q15617 311 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 SLC25A34Q6PIV7 304 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 RASL11AQ6T310 242 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 ZNF767PQ75MW2 155 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 ADM2Q7Z4H4 148 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 SPATA12Q7Z6I5 190 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 IFT20Q8IY31 132 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 TCTE3Q8IZS6 198 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 RNF175Q8N4F7 328 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 PPTC7Q8NI37 304 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 C1orf54Q8WWF1 131 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 AP1S3Q96PC3 154 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 GPX7Q96SL4 187 aaPredicted RBP3.02□□□□□ -1.93
CHD9-220ENST00000569794 AICDAQ9GZX7 198 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 LHX9Q9NQ69 397 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 MCTS1Q9ULC4 181 aaKnown RBP3.02□□□□□ -1.93
CHD9-220ENST00000569794 HIGD1AQ9Y241 93 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 TRAPPC1Q9Y5R8 145 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 ICOSQ9Y6W8 199 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 FAM135AQ9P2D6 1515 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 CAMSAP2Q08AD1 1489 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 SHANK3Q9BYB0 1731 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 DISP2A7MBM2 1401 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 BCL9O00512 1426 aa3.02□□□□□ -1.93
CHD9-220ENST00000569794 RAI1Q7Z5J4 1906 aaPredicted RBP3.01□□□□□ -1.93
CHD9-220ENST00000569794 PIKFYVEQ9Y2I7 2098 aa3.01□□□□□ -1.93
CHD9-220ENST00000569794 A0A096LNJ9 63 aa3.01□□□□□ -1.93
CHD9-220ENST00000569794 TRAV5A0A0B4J249 113 aa3.01□□□□□ -1.93
CHD9-220ENST00000569794 TRDV1A0A1B0GX56 115 aa3.01□□□□□ -1.93
CHD9-220ENST00000569794 DHRS12A0PJE2 317 aa3.01□□□□□ -1.93
CHD9-220ENST00000569794 OVOL1O14753 267 aa3.01□□□□□ -1.93
CHD9-220ENST00000569794 TAX1BP3O14907 124 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms