RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 COMMD9Q9P000 198 aa4.07□□□□□ -1.76
CHD9-205ENST00000562785 PIPOXQ9P0Z9 390 aa4.07□□□□□ -1.76
CHD9-205ENST00000562785 OR1A1Q9P1Q5 309 aa4.07□□□□□ -1.76
CHD9-205ENST00000562785 CACFD1Q9UGQ2 172 aa4.07□□□□□ -1.76
CHD9-205ENST00000562785 RPUSD1Q9UJJ7 312 aaKnown RBP4.07□□□□□ -1.76
CHD9-205ENST00000562785 AMMECR1Q9Y4X0 333 aaPredicted RBP4.07□□□□□ -1.76
CHD9-205ENST00000562785 ESPL1Q14674 2120 aa4.07□□□□□ -1.76
CHD9-205ENST00000562785 RP1L1Q8IWN7 2480 aaPredicted RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 IGLV8-61A0A075B6I0 122 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 C3orf85A0A1B0GTC6 90 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 M0R1W7 72 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 HSD17B6O14756 317 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 RAB29O14966 203 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 CDS2O95674 445 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 C1QBP02746 253 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 TFF1P04155 84 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 OR5AC1P0C628 307 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 OR8U9P0C7N5 309 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 SLC25A16P16260 332 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 HLA-GP17693 338 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 F2RP25116 425 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 PPP1CCP36873 323 aaKnown RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 ATP5J2P56134 94 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 SLC9A3R2Q15599 337 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 TIGITQ495A1 244 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 AVPI1Q5T686 147 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 THOC7Q6I9Y2 204 aaKnown RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 ZNF818PQ6ZRF7 136 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 TGIF2LYQ8IUE0 185 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 OR8U1Q8NH10 309 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 RNASE11Q8TAA1 199 aaKnown RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 TCTEX1D2Q8WW35 142 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 TMEM230Q96A57 120 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 RTBDNQ9BSG5 229 aaPredicted RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 TMEM222Q9H0R3 208 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 RANBP3Q9H6Z4 567 aaPredicted RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 PATZ1Q9HBE1 687 aaKnown RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 PRELID3BQ9Y3B1 194 aa4.06□□□□□ -1.76
CHD9-205ENST00000562785 KMT2BQ9UMN6 2715 aaPredicted RBP4.06□□□□□ -1.76
CHD9-205ENST00000562785 PRRC2CQ9Y520 2896 aaKnown RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 NOTCH3Q9UM47 2321 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 UBR5O95071 2799 aaPredicted RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 TRAV39A0A0B4J263 110 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 IGKV1D-13A0A0B4J2D9 117 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 A0A1B0GW55 424 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 CYSRT1A8MQ03 144 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 TOR1AO14656 332 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 RBFOX2O43251 390 aaKnown RBP eCLIP4.05□□□□□ -1.76
CHD9-205ENST00000562785 FOXH1O75593 365 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 IGHV2-5P01817 119 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 APOA2P02652 100 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DUX4L2P0CJ85 424 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DUX4L3P0CJ86 424 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DUX4L4P0CJ87 422 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DUX4L5P0CJ88 424 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DUX4L6P0CJ89 424 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DUX4L7P0CJ90 424 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 CGB3P0DN86 165 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 CGB7P0DN87 165 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 IGHV1-8P0DP01 117 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 IGKV1-13P0DP09 117 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 VDAC1P21796 283 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 COL8A2P25067 703 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 NFYBP25208 207 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 GNRHRP30968 328 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 CEACAM3P40198 252 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 EIF2B2P49770 351 aaKnown RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 RAB13P51153 203 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 AKR1C2P52895 323 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 SUPT4H1P63272 117 aaKnown RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 GNMTQ14749 295 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 SMCO1Q147U7 214 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 PRR4Q16378 134 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 RTL8BQ17RB0 113 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 MORN2Q502X0 79 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 PRAMEF5Q5TYX0 476 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DUX4L9Q6RFH8 374 aaPredicted RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 SLC25A48Q6ZT89 311 aaKnown RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 TCF23Q7RTU1 214 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 ZNF695Q8IW36 515 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 LRRC75A-AS1Q8N1F1 130 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 LINC00311Q8N616 119 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 DRAM1Q8N682 238 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 OR11H7Q8NGC8 314 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 OR13D1Q8NGV5 346 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 OR2T35Q8NGX2 323 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 OR10X1Q8NGY0 326 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 OR51H1Q8NH63 302 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 OR4S2Q8NH73 311 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 OR9G1Q8NH87 305 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 ZNF596Q8TC21 504 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 RBPMSQ93062 196 aaKnown RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 ABHD14BQ96IU4 210 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 HYLS1Q96M11 299 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 TMEM56Q96MV1 263 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 NMES1Q9C002 83 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 TMEM133Q9H2Q1 129 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 IFI27L2Q9H2X8 130 aa4.05□□□□□ -1.76
CHD9-205ENST00000562785 METTL8Q9H825 291 aaKnown RBP4.05□□□□□ -1.76
CHD9-205ENST00000562785 CCL28Q9NRJ3 127 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms