RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 C2orf83Q53S99 150 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 C10orf55Q5SWW7 151 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 SLC25A24Q6NUK1 477 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 ETV3LQ6ZN32 361 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 PPP1R27Q86WC6 154 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 LINC01356Q8N9X3 169 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 NPBQ8NG41 125 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 OR10P1Q8NGE3 313 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 OR10W1Q8NGF6 305 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 OR2T10Q8NGZ9 312 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 SCGB1C1Q8TD33 95 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 SAT2Q96F10 170 aaPredicted RBP5.99□□□□□ -1.45
TPM1-231ENST00000561395 GGACTQ9BVM4 153 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 WDR61Q9GZS3 305 aaKnown RBP5.99□□□□□ -1.45
TPM1-231ENST00000561395 UQCC1Q9NVA1 299 aa5.99□□□□□ -1.45
TPM1-231ENST00000561395 METTL1Q9UBP6 276 aaKnown RBP5.99□□□□□ -1.45
TPM1-231ENST00000561395 WNK1Q9H4A3 2382 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 TRAV40A0A0B4J280 105 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 IGLC7A0M8Q6 106 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 IFNA4P05014 189 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 RNASE2P10153 161 aaKnown RBP5.98□□□□□ -1.45
TPM1-231ENST00000561395 MDKP21741 143 aaPredicted RBP5.98□□□□□ -1.45
TPM1-231ENST00000561395 CD24P25063 80 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 BLOC1S1P78537 153 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 SSBP2P81877 361 aaPredicted RBP5.98□□□□□ -1.45
TPM1-231ENST00000561395 WT1-ASQ06250 92 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 HES1Q14469 280 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 PLGLAQ15195 96 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 TNXAQ16473 311 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 C5orf64Q2M2E5 130 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 RUSC1-AS1Q66K80 236 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 TMEM182Q6ZP80 229 aaPredicted RBP5.98□□□□□ -1.45
TPM1-231ENST00000561395 MRPL41Q8IXM3 137 aaKnown RBP5.98□□□□□ -1.45
TPM1-231ENST00000561395 OR2G3Q8NGZ4 309 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 TAF15Q92804 592 aaKnown RBP eCLIP5.98□□□□□ -1.45
TPM1-231ENST00000561395 PSMG3Q9BT73 122 aaPredicted RBP5.98□□□□□ -1.45
TPM1-231ENST00000561395 RSG1Q9BU20 258 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 FBXL15Q9H469 300 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 HIF1ANQ9NWT6 349 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 KIAA1456Q9P272 454 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 PFDN2Q9UHV9 154 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 TIMM9Q9Y5J7 89 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 RFNGQ9Y644 331 aa5.98□□□□□ -1.45
TPM1-231ENST00000561395 IGHV3OR16-10A0A075B7F0 116 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 MFSD2BA6NFX1 497 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 TEX22C9J3V5 150 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 UMAD1C9J7I0 102 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 FNDC10F2Z333 226 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 ACTL6BO94805 426 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 IGHV4-38-2P0DP08 117 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 TMEM11P17152 192 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 FGF7P21781 194 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 S100A1P23297 94 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 BRS3P32247 399 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 SNCAP37840 140 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 GNB1P62873 340 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 ERHP84090 104 aaKnown RBP5.97□□□□□ -1.45
TPM1-231ENST00000561395 HNF4GQ14541 408 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 PXDC1Q5TGL8 231 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 TREML4Q6UXN2 200 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 Q6ZRG5 221 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 CENPVQ7Z7K6 275 aaPredicted RBP5.97□□□□□ -1.45
TPM1-231ENST00000561395 ZNF114Q8NC26 417 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 SRSF8Q9BRL6 282 aaKnown RBP5.97□□□□□ -1.45
TPM1-231ENST00000561395 C7orf69Q9H7B7 122 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 PARP11Q9NR21 331 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 WDR83OSQ9Y284 106 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 FBXO7Q9Y3I1 522 aa5.97□□□□□ -1.45
TPM1-231ENST00000561395 PLXNB1O43157 2135 aa5.96□□□□□ -1.45
TPM1-231ENST00000561395 SMCO3A2RU48 225 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 NUDT19A8MXV4 375 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 TEX46H3BTG2 121 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 J3QLI3 93 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 FCN1O00602 326 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 MPDU1O75352 247 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 PRH1P02810 166 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 FAM106CPP0CH98 169 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 OR13C7P0DN81 318 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 CAMLGP49069 296 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 FHITP49789 147 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 SERF2P84101 59 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 FOXL1Q12952 345 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 AANATQ16613 207 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 KLF17Q5JT82 389 aaPredicted RBP5.96□□□□□ -1.46
TPM1-231ENST00000561395 AKR1C8PQ5T2L2 129 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 PVRIGQ6DKI7 326 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 SHISA2Q6UWI4 295 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 BTNL8Q6UX41 500 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 DPPA3Q6W0C5 159 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 BRD3OSQ6XYD6 125 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 REC114Q7Z4M0 266 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 HSD17B13Q7Z5P4 300 aaPredicted RBP5.96□□□□□ -1.46
TPM1-231ENST00000561395 EIF4E3Q8N5X7 224 aaKnown RBP5.96□□□□□ -1.46
TPM1-231ENST00000561395 LYPD6BQ8NI32 183 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 FAM213BQ8TBF2 198 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 RNASEH2CQ8TDP1 164 aaKnown RBP5.96□□□□□ -1.46
TPM1-231ENST00000561395 SRSF12Q8WXF0 261 aaKnown RBP5.96□□□□□ -1.46
TPM1-231ENST00000561395 P2RX4Q99571 388 aa5.96□□□□□ -1.46
TPM1-231ENST00000561395 NPCDR1Q9BY65 106 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms