RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SNCAP37840 140 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 RPL27AP46776 148 aaKnown RBP5.86□□□□□ -1.47
SPG11-204ENST00000557866 MFAP2P55001 183 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 ELLP55199 621 aaPredicted RBP5.86□□□□□ -1.47
SPG11-204ENST00000557866 ATP5IP56385 69 aaPredicted RBP5.86□□□□□ -1.47
SPG11-204ENST00000557866 LGALS4P56470 323 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 ERHP84090 104 aaKnown RBP5.86□□□□□ -1.47
SPG11-204ENST00000557866 SERF2P84101 59 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 AKR1C1Q04828 323 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 ZNF616Q08AN1 781 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 EBI3Q14213 229 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 PVRIGQ6DKI7 326 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 CCDC144NLQ6NUI1 221 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 UQCC3Q6UW78 93 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 DPPA3Q6W0C5 159 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 C19orf35Q6ZS72 473 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 SSX7Q7RTT5 188 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 PPP1R27Q86WC6 154 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 MMD2Q8IY49 270 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 MALSU1Q96EH3 234 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 P2RX4Q99571 388 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 SPATA25Q9BR10 227 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 NPCDR1Q9BY65 106 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 TMEM231Q9H6L2 316 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 FAM96BQ9Y3D0 163 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 DOCK11Q5JSL3 2073 aa5.86□□□□□ -1.47
SPG11-204ENST00000557866 TNCP24821 2201 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 TMEM218A2RU14 115 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 SMCO3A2RU48 225 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 FNDC10F2Z333 226 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 NBR2O15453 112 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 YIF1AO95070 293 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 REG1AP05451 166 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 CD5P06127 495 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 MSMBP08118 114 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 OR13C7P0DN81 318 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 AREGP15514 252 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 SLC25A16P16260 332 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 ADCYAP1P18509 176 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 MAS1LP35410 378 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 SAA4P35542 130 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 RAB2AP61019 212 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 GNB1P62873 340 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 CD69Q07108 199 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 MMDQ15546 238 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 TNXAQ16473 311 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 TMEM41BQ5BJD5 291 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 FFAR4Q5NUL3 377 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 RUSC1-AS1Q66K80 236 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 CRYBG3Q68DQ2 2970 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 RPP25LQ8N5L8 163 aaKnown RBP5.85□□□□□ -1.47
SPG11-204ENST00000557866 LINC00482Q8N8I6 264 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 OR2T10Q8NGZ9 312 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 MBD3L1Q8WWY6 194 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 GGTLC1Q9BX51 225 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 FNDC4Q9H6D8 234 aaPredicted RBP5.85□□□□□ -1.47
SPG11-204ENST00000557866 NPVFQ9HCQ7 196 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 DMRT1Q9Y5R6 373 aa5.85□□□□□ -1.47
SPG11-204ENST00000557866 SOX21Q9Y651 276 aaPredicted RBP5.85□□□□□ -1.47
SPG11-204ENST00000557866 CSMD2Q7Z408 3487 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 TET2Q6N021 2002 aaPredicted RBP5.84□□□□□ -1.47
SPG11-204ENST00000557866 IGKV1OR2-108A0A075B7D4 117 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 TRAV1-1A0A0B4J248 108 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 IGHV1-69DA0A0B4J2H0 117 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 KRBOX1C9JBD0 128 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 IGHV1-69P01742 117 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 APELAP0DMC3 54 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 IGHV4-38-2P0DP08 117 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 GPX4P36969 197 aaPredicted RBP5.84□□□□□ -1.47
SPG11-204ENST00000557866 NDPQ00604 133 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 GAMTQ14353 236 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 HES1Q14469 280 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 GUK1Q16774 197 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 C5orf64Q2M2E5 130 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 DEFB113Q30KQ7 82 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 GCSAMLQ5JQS6 135 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 KLF17Q5JT82 389 aaPredicted RBP5.84□□□□□ -1.47
SPG11-204ENST00000557866 MIC13Q5XKP0 118 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 COMMD1Q8N668 190 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 ZNF114Q8NC26 417 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 MAPK1IP1LQ8NDC0 245 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 OR2T6Q8NHC8 308 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 SFT2D1Q8WV19 159 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 SRSF12Q8WXF0 261 aaKnown RBP5.84□□□□□ -1.47
SPG11-204ENST00000557866 CCDC140Q96MF4 163 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 RARRES2Q99969 163 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 TREM1Q9NP99 234 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 BEX4Q9NWD9 120 aaPredicted RBP5.84□□□□□ -1.47
SPG11-204ENST00000557866 MRPL36Q9P0J6 103 aaKnown RBP5.84□□□□□ -1.47
SPG11-204ENST00000557866 SLC45A2Q9UMX9 530 aa5.84□□□□□ -1.47
SPG11-204ENST00000557866 USP9YO00507 2555 aaPredicted RBP5.84□□□□□ -1.47
SPG11-204ENST00000557866 B4DSR2 109 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 SMAD7O15105 426 aaKnown RBP5.83□□□□□ -1.48
SPG11-204ENST00000557866 MPDU1O75352 247 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 SCO1O75880 301 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 ACTL6BO94805 426 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 IGHV3-48P01763 117 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 LINC00869P0C866 280 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 DEFA4P12838 97 aa5.83□□□□□ -1.48
SPG11-204ENST00000557866 TMEM11P17152 192 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms