RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 CCL28Q9NRJ3 127 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 PTTG2Q9NZH5 202 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 ELF5Q9UKW6 265 aaPredicted RBP9.69□□□□□ -0.86
PRPF39-204ENST00000553605 PUS1Q9Y606 427 aaKnown RBP eCLIP9.69□□□□□ -0.86
PRPF39-204ENST00000553605 MT-CO2P00403 227 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 ZNF600Q6ZNG1 722 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 SECTM1Q8WVN6 248 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 MOB3AQ96BX8 217 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 TMEM56Q96MV1 263 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 PLEKHA2Q9HB19 425 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 OR51B2Q9Y5P1 312 aa9.68□□□□□ -0.86
PRPF39-204ENST00000553605 RPS10-NUDT3A0A1W2PQS6 291 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 HELTA6NFD8 242 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 H3BMM0 161 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 NUDT3O95989 172 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
PRPF39-204ENST00000553605 P2RY1P47900 373 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 DAD1P61803 113 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 DLK1P80370 383 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 CATR1Q13166 79 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 DHRS2Q13268 280 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 HES5Q5TA89 166 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 ZBTB34Q8NCN2 500 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 Q9H8V8 135 aa9.67□□□□□ -0.86
PRPF39-204ENST00000553605 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
PRPF39-204ENST00000553605 A0A1B0GU03 582 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 ATP8B1O43520 1251 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 CIB2O75838 187 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 GNRHRP30968 328 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 ERVK-16P61578 105 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 MSMO1Q15800 293 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 KCTD21Q4G0X4 260 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 SERTAD4-AS1Q5TG53 156 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 TMEM203Q969S6 136 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 PINX1Q96BK5 328 aaKnown RBP9.66□□□□□ -0.86
PRPF39-204ENST00000553605 C17orf77Q96MU5 243 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 NSG2Q9Y328 171 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 V9GY05 133 aa9.66□□□□□ -0.86
PRPF39-204ENST00000553605 FAM229AH3BQW9 127 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 CRYBB3P26998 211 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 NPBWR1P48145 328 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 OGFRL1Q5TC84 451 aaPredicted RBP9.65□□□□□ -0.86
PRPF39-204ENST00000553605 TMEM91Q6ZNR0 172 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 AHSA2Q719I0 299 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 METTL26Q96S19 204 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 KRTAP1-5Q9BYS1 174 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 COMMD9Q9P000 198 aa9.65□□□□□ -0.86
PRPF39-204ENST00000553605 LOC102723971A0A1B0GUV8 181 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 METTL21EPA6NDL7 271 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 MARCH11A6NNE9 402 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 ARL6IP5O75915 188 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 SNAPC5O75971 98 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 RAB6AP20340 208 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 FUSP35637 526 aaKnown RBP eCLIP9.64□□□□□ -0.87
PRPF39-204ENST00000553605 EIF2B2P49770 351 aaKnown RBP9.64□□□□□ -0.87
PRPF39-204ENST00000553605 RASSF2P50749 326 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 FXYD7P58549 80 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 ARL6IP1Q15041 203 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 CDNFQ49AH0 187 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 ZFP1Q6P2D0 407 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 SYT8Q8NBV8 401 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 OR51H1Q8NH63 302 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 FKBP11Q9NYL4 201 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 PSORS1C1Q9UIG5 152 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 ANXA10Q9UJ72 324 aa9.64□□□□□ -0.87
PRPF39-204ENST00000553605 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 TMEM50AO95807 157 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 HBE1P02100 147 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 FCGR2CP31995 323 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 ALDH3B2P48448 385 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 SNRPD3P62318 126 aaKnown RBP9.63□□□□□ -0.87
PRPF39-204ENST00000553605 HACD4Q5VWC8 232 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 TPRA1Q86W33 373 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 OR13F1Q8NGS4 319 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 NARS2Q96I59 477 aaKnown RBP9.63□□□□□ -0.87
PRPF39-204ENST00000553605 SLC5A7Q9GZV3 580 aa9.63□□□□□ -0.87
PRPF39-204ENST00000553605 KRASP01116 189 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 IGKV3-20P01619 116 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 CALRP27797 417 aaKnown RBP9.62□□□□□ -0.87
PRPF39-204ENST00000553605 HOXA1P49639 335 aaPredicted RBP9.62□□□□□ -0.87
PRPF39-204ENST00000553605 PPP5CP53041 499 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 AP2S1P53680 142 aaPredicted RBP9.62□□□□□ -0.87
PRPF39-204ENST00000553605 USF2Q15853 346 aaPredicted RBP9.62□□□□□ -0.87
PRPF39-204ENST00000553605 AADACL3Q5VUY0 350 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 Q6ZSN1 163 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 MND1Q9BWT6 205 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 ATG5Q9H1Y0 275 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 Q9H3A6 140 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 PRNDQ9UKY0 176 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
PRPF39-204ENST00000553605 DBX1A6NMT0 343 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 FAM90A26D6RGX4 464 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 PPYP01298 95 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms