RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 BTNL8Q6UX41 500 aa11.27□□□□□ -0.61
LETMD1-229ENST00000551261 NPCDR1Q9BY65 106 aa11.27□□□□□ -0.61
LETMD1-229ENST00000551261 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
LETMD1-229ENST00000551261 VPREB3Q9UKI3 123 aa11.27□□□□□ -0.61
LETMD1-229ENST00000551261 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.61
LETMD1-229ENST00000551261 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.61
LETMD1-229ENST00000551261 ASH1LQ9NR48 2969 aaKnown RBP11.27□□□□□ -0.61
LETMD1-229ENST00000551261 SMCO3A2RU48 225 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 TEX46H3BTG2 121 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
LETMD1-229ENST00000551261 DEFA4P12838 97 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 AKIRIN2Q53H80 203 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 Q6YL49 198 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 CIARTQ8N365 385 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-229ENST00000551261 FAM110DQ8TAY7 271 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-229ENST00000551261 PFDN2Q9UHV9 154 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 PDZD2O15018 2839 aa11.26□□□□□ -0.61
LETMD1-229ENST00000551261 LINC00862A6NCI5 91 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 BRI3O95415 125 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 IGF1P05019 195 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 FAM157CP0CG43 387 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 FOSL1P15407 271 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 RAB2AP61019 212 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 SELENOTP62341 195 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 FBLN7Q53RD9 439 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-229ENST00000551261 TMEM116Q8NCL8 245 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 RBMXL1Q96E39 390 aaKnown RBP11.25□□□□□ -0.61
LETMD1-229ENST00000551261 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
LETMD1-229ENST00000551261 HECTD1Q9ULT8 2610 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-229ENST00000551261 H3BUA1 57 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 IGHG2P01859 326 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 PRH1P02810 166 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 FABP1P07148 127 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 SRP14P37108 136 aaKnown RBP11.24□□□□□ -0.61
LETMD1-229ENST00000551261 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
LETMD1-229ENST00000551261 CAMLGP49069 296 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 NDPQ00604 133 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 RUNX1Q01196 453 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 TMEM41BQ5BJD5 291 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 SPNS3Q6ZMD2 512 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 TMEM182Q6ZP80 229 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-229ENST00000551261 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 LFNGQ8NES3 379 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 ZNF48Q96MX3 618 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-229ENST00000551261 ATP6V0BQ99437 205 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 WNT10AQ9GZT5 417 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 SH3BGRL3Q9H299 93 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 VPS13CQ709C8 3753 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
LETMD1-229ENST00000551261 ATP6V0E1O15342 81 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 HBE1P02100 147 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 KRTAP1-1Q07627 177 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 GAMTQ14353 236 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
LETMD1-229ENST00000551261 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
LETMD1-229ENST00000551261 TMEM219Q86XT9 240 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 THAP8Q8NA92 274 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 MISP3Q96FF7 219 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 HSPB9Q9BQS6 159 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
LETMD1-229ENST00000551261 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
LETMD1-229ENST00000551261 IGLV11-55A0A075B6I3 123 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 AP4M1O00189 453 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 TSPAN15O95858 294 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 REG1AP05451 166 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
LETMD1-229ENST00000551261 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 UNQ5815/PRO19632Q6UWF5 114 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 IL34Q6ZMJ4 242 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 Q6ZRG5 221 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 SLC35E3Q7Z769 313 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 GGTLC1Q9BX51 225 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
LETMD1-229ENST00000551261 ABCA1O95477 2261 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 TRAV41A0A0B4J266 112 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 I3L2K1 104 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 AGPAT2O15120 278 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 MT-CO2P00403 227 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 IGHV4-59P01825 116 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 AMY1AP04745 511 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 EGR2P11161 476 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-229ENST00000551261 M6PRP20645 277 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 FCGR2BP31994 310 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-229ENST00000551261 NPBWR1P48145 328 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 LY6EQ16553 131 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 BCL6BQ8N143 479 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-229ENST00000551261 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 LYPD6BQ8NI32 183 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 VN1R17PQ8TDU5 208 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 CXorf58Q96LI9 332 aa11.21□□□□□ -0.61
LETMD1-229ENST00000551261 TRGV9Q99603 122 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms