RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 MT-CO2P00403 227 aa13.72□□□□□ -0.21
LTBR-211ENST00000543190 ERHP84090 104 aaKnown RBP13.72□□□□□ -0.21
LTBR-211ENST00000543190 AARDQ4LEZ3 155 aa13.72□□□□□ -0.21
LTBR-211ENST00000543190 GINS3Q9BRX5 216 aa13.72□□□□□ -0.21
LTBR-211ENST00000543190 AGRNO00468 2067 aa13.71□□□□□ -0.21
LTBR-211ENST00000543190 B3GALNT1O75752 331 aa13.71□□□□□ -0.21
LTBR-211ENST00000543190 NPBWR1P48145 328 aa13.71□□□□□ -0.21
LTBR-211ENST00000543190 MRGPRFQ96AM1 343 aa13.71□□□□□ -0.21
LTBR-211ENST00000543190 CORTO00230 105 aa13.7□□□□□ -0.22
LTBR-211ENST00000543190 GNG7O60262 68 aa13.7□□□□□ -0.22
LTBR-211ENST00000543190 ELK1P19419 428 aa13.7□□□□□ -0.22
LTBR-211ENST00000543190 MISP3Q96FF7 219 aa13.7□□□□□ -0.22
LTBR-211ENST00000543190 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
LTBR-211ENST00000543190 ZFAND3Q9H8U3 227 aa13.7□□□□□ -0.22
LTBR-211ENST00000543190 COMMD3Q9UBI1 195 aa13.7□□□□□ -0.22
LTBR-211ENST00000543190 IGHV3OR16-8A0A075B7F1 116 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 A0A0B4J293 547 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 MPTX1A8MV57 137 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 ZNF207O43670 478 aaKnown RBP13.69□□□□□ -0.22
LTBR-211ENST00000543190 ATG12O94817 140 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 RPL5P46777 297 aaKnown RBP13.69□□□□□ -0.22
LTBR-211ENST00000543190 LSM3P62310 102 aaKnown RBP13.69□□□□□ -0.22
LTBR-211ENST00000543190 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 BSXQ3C1V8 233 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 LGALS9CQ6DKI2 356 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 ZNF600Q6ZNG1 722 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 DUSP18Q8NEJ0 188 aa13.69□□□□□ -0.22
LTBR-211ENST00000543190 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 RPL35AP18077 110 aaKnown RBP13.68□□□□□ -0.22
LTBR-211ENST00000543190 TCTAP57738 103 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 NCS1P62166 190 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 PMS2P11Q13670 270 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 APRG1Q8IVJ8 170 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 C15orf40Q8WUR7 153 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 MFFQ9GZY8 342 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 MTFP1Q9UDX5 166 aa13.68□□□□□ -0.22
LTBR-211ENST00000543190 YIF1AO95070 293 aa13.67□□□□□ -0.22
LTBR-211ENST00000543190 TMEM50AO95807 157 aa13.67□□□□□ -0.22
LTBR-211ENST00000543190 LY6G6CO95867 125 aa13.67□□□□□ -0.22
LTBR-211ENST00000543190 RORCP51449 518 aa13.67□□□□□ -0.22
LTBR-211ENST00000543190 SNX29P2Q8IUI4 249 aa13.67□□□□□ -0.22
LTBR-211ENST00000543190 PHLDA1Q8WV24 401 aaPredicted RBP13.67□□□□□ -0.22
LTBR-211ENST00000543190 CD74P04233 296 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 RNASE2P10153 161 aaKnown RBP13.66□□□□□ -0.22
LTBR-211ENST00000543190 UCP1P25874 307 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 SNCAP37840 140 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 SUB1P53999 127 aaKnown RBP eCLIP13.66□□□□□ -0.22
LTBR-211ENST00000543190 PIGPP57054 158 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 VBP1P61758 197 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 SSBP1Q04837 148 aaKnown RBP13.66□□□□□ -0.22
LTBR-211ENST00000543190 TMEM41BQ5BJD5 291 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 RNASE10Q5GAN6 216 aaKnown RBP13.66□□□□□ -0.22
LTBR-211ENST00000543190 MZT2AQ6P582 158 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 TERB2Q8NHR7 220 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 GRAMD2BQ96HH9 432 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 TP53RKQ96S44 253 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 RARRES2Q99969 163 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 TMEM231Q9H6L2 316 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 KLK11Q9UBX7 282 aa13.66□□□□□ -0.22
LTBR-211ENST00000543190 ST8SIA3O43173 380 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 HPGDSO60760 199 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 CRYBB3P26998 211 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 FAM219AQ8IW50 185 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 LILRB2Q8N423 598 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 OR4X1Q8NH49 305 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 OR52E5Q8NH55 327 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 ZFAND1Q8TCF1 268 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 ST8SIA2Q92186 375 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 AP3S1Q92572 193 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 MS4A6AQ9H2W1 248 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 HRH4Q9H3N8 390 aa13.65□□□□□ -0.22
LTBR-211ENST00000543190 PUS1Q9Y606 427 aaKnown RBP eCLIP13.65□□□□□ -0.22
LTBR-211ENST00000543190 C3orf85A0A1B0GTC6 90 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 A0A1B0GU03 582 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 A0A1W2PS18 150 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 M0QYG6 137 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 CLN5O75503 358 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 GABARAPO95166 117 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 ZNF124Q15973 351 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 CTF1Q16619 201 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 SLC35G3Q8N808 338 aa13.64□□□□□ -0.23
LTBR-211ENST00000543190 PINX1Q96BK5 328 aaKnown RBP13.64□□□□□ -0.23
LTBR-211ENST00000543190 CDS2O95674 445 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 IGHV3-48P01763 117 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 CD3DP04234 171 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 ZNF182P17025 639 aaPredicted RBP13.63□□□□□ -0.23
LTBR-211ENST00000543190 AKR1C2P52895 323 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 CCDC71LQ8N9Z2 235 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 TMEM229BQ8NBD8 167 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 OR11H2Q8NH07 326 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 OR52I2Q8NH67 350 aa13.63□□□□□ -0.23
LTBR-211ENST00000543190 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
LTBR-211ENST00000543190 TRAV30A0A087WSZ9 112 aa13.62□□□□□ -0.23
LTBR-211ENST00000543190 SCGB2A1O75556 95 aa13.62□□□□□ -0.23
LTBR-211ENST00000543190 APOHP02749 345 aaPredicted RBP13.62□□□□□ -0.23
LTBR-211ENST00000543190 PGAM2P15259 253 aa13.62□□□□□ -0.23
LTBR-211ENST00000543190 NPPCP23582 126 aa13.62□□□□□ -0.23
LTBR-211ENST00000543190 SURF2Q15527 256 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms