RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 MDFIQ99750 246 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 ATG101Q9BSB4 218 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 UBTD1Q9HAC8 227 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 HES4Q9HCC6 221 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 CLN8Q9UBY8 286 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 NAT8BQ9UHF3 227 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 JPT1Q9UK76 154 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 LAMTOR2Q9Y2Q5 125 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 ABCA2Q9BZC7 2435 aa8.58□□□□□ -1.04
CHFR-219ENST00000541341 IQCF6A8MYZ5 107 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 J3QR06 171 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 ZNF324O75467 553 aaPredicted RBP8.57□□□□□ -1.04
CHFR-219ENST00000541341 TOX4O94842 621 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 PATE4P0C8F1 98 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 ARL14EPLP0DKL9 152 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 KIR2DL2P43627 348 aaPredicted RBP8.57□□□□□ -1.04
CHFR-219ENST00000541341 GPR12P47775 334 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 AMTP48728 403 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 SELENOVP59797 346 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 RPL31P62899 125 aaKnown RBP8.57□□□□□ -1.04
CHFR-219ENST00000541341 MRPS11P82912 194 aaKnown RBP8.57□□□□□ -1.04
CHFR-219ENST00000541341 ZNF718Q3SXZ3 478 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 FBXL19-AS1Q494R0 122 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 PSMG4Q5JS54 123 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 Q5PR19 223 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 PRAMEF5Q5TYX0 476 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 FBXW9Q5XUX1 488 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 VWA1Q6PCB0 445 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 FAM231DQ6ZW35 169 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 Q6ZWC4 215 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 TUSC5Q8IXB3 177 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 OR5T1Q8NG75 326 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 OR4S2Q8NH73 311 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 C22orf15Q8WYQ4 148 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 PERPQ96FX8 193 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 Q96MF0 132 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 PMCHL2Q9BQD1 86 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 SAP30LQ9HAJ7 183 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 C1RLQ9NZP8 487 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 PAM16Q9Y3D7 125 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 CR1P17927 2039 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 CHD3Q12873 2000 aaKnown RBP8.57□□□□□ -1.04
CHFR-219ENST00000541341 ARID1AO14497 2285 aa8.57□□□□□ -1.04
CHFR-219ENST00000541341 IZUMO1RA6ND01 250 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 C15orf62A8K5M9 175 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 TOMM40O96008 361 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 CGAP01215 116 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 OR5AL1P0C617 328 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 NPPCP23582 126 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 NPY1RP25929 384 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 NTF4P34130 210 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 EDDM3BP56851 147 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 KRTDAPP60985 99 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 FAM27E3Q08E93 113 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 ZNF816Q0VGE8 651 aaPredicted RBP8.56□□□□□ -1.04
CHFR-219ENST00000541341 UBE2V1Q13404 147 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 SPATA46Q5T0L3 261 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 TREML4Q6UXN2 200 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 Q6ZN92 141 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 C11orf42Q8N5U0 333 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 STXBP6Q8NFX7 210 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 OR1K1Q8NGR3 316 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 OR1L1Q8NH94 360 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 FGFBP3Q8TAT2 258 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 CYYR1Q96J86 154 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 S1PR3Q99500 378 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 GGTLC1Q9BX51 225 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 PLEKHA3Q9HB20 300 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 NRN1Q9NPD7 142 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 PLSCR4Q9NRQ2 329 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 JKAMPQ9P055 326 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 PRNDQ9UKY0 176 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 ZNF257Q9Y2Q1 563 aa8.56□□□□□ -1.04
CHFR-219ENST00000541341 NSD1Q96L73 2696 aaPredicted RBP8.56□□□□□ -1.04
CHFR-219ENST00000541341 CUBNO60494 3623 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 TRAV30A0A087WSZ9 112 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 IGHV1-69-2A0A0G2JMI3 117 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 HSBP1L1C9JCN9 74 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 HBZP02008 142 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 APCSP02743 223 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 IGLC2P0DOY2 106 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 CA6P23280 308 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 CTRLP40313 264 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 CDKN1BP46527 198 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 IER3P46695 156 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 GABRA2P47869 451 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 ATP5G3P48201 142 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 KLF5Q13887 457 aaPredicted RBP8.55□□□□□ -1.04
CHFR-219ENST00000541341 C12orf54Q6X4T0 127 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 CXorf67Q86X51 503 aaPredicted RBP8.55□□□□□ -1.04
CHFR-219ENST00000541341 PRR18Q8N4B5 295 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 CNEP1R1Q8N9A8 125 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 OR4P4Q8NGL7 312 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 DNAJC4Q9NNZ3 241 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 LSM4Q9Y4Z0 139 aaKnown RBP8.55□□□□□ -1.04
CHFR-219ENST00000541341 ZANQ9Y493 2812 aa8.55□□□□□ -1.04
CHFR-219ENST00000541341 FN1P02751 2386 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms