RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 DIP2CQ9Y2E4 1556 aa3.76□□□□□ -1.81
NXF1-205ENST00000527497 RTL9Q8NET4 1388 aa3.76□□□□□ -1.81
NXF1-205ENST00000527497 PRXQ9BXM0 1461 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 LTBP4Q8N2S1 1624 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 CCDC160A6NGH7 325 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 A8MWP6 167 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 UBBP0CG47 229 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 MUC1P15941 1255 aaPredicted RBP3.75□□□□□ -1.81
NXF1-205ENST00000527497 SLC25A16P16260 332 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 RPL7P18124 248 aaKnown RBP3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST1H2BOP23527 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST1H2BBP33778 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST1H2BDP58876 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST1H2BCP62807 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST2H2BEQ16778 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 C2orf83Q53S99 150 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.75□□□□□ -1.81
NXF1-205ENST00000527497 LDLRAD2Q5SZI1 272 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 RPL22L1Q6P5R6 122 aaKnown RBP3.75□□□□□ -1.81
NXF1-205ENST00000527497 SPATA12Q7Z6I5 190 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 EXOC3-AS1Q8N2X6 119 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 ZNF709Q8N972 641 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST1H2BHQ93079 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 MGLLQ99685 303 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST1H2BNQ99877 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 HIST1H2BMQ99879 126 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 CDC42BPAQ5VT25 1732 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 EFCAB5A4FU69 1503 aa3.75□□□□□ -1.81
NXF1-205ENST00000527497 GOLGA3Q08378 1498 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 MYO3AQ8NEV4 1616 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 GRIFINA4D1Z8 144 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 FAM25AB3EWG3 89 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 FAM25CB3EWG5 89 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 FAM25GB3EWG6 89 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 H3BQ85 93 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 BANF1O75531 89 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 POLR1AO95602 1720 aaPredicted RBP3.74□□□□□ -1.81
NXF1-205ENST00000527497 PRM2P04554 102 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 ZNF286BP0CG31 522 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 CCL3P10147 92 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 CSN1S1P47710 185 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 POLR2HP52434 150 aaKnown RBP3.74□□□□□ -1.81
NXF1-205ENST00000527497 CACNA1SQ13698 1873 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 LYRM7Q5U5X0 104 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 FMN1Q68DA7 1419 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 C4orf22Q6V702 233 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 OR10D4PQ8NGN7 298 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 TCEAL7Q9BRU2 100 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 GGACTQ9BVM4 153 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 RNF122Q9H9V4 155 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 XAGE1AQ9HD64 81 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 CALML5Q9NZT1 146 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 TP53TG3Q9ULZ0 132 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 AMMECR1Q9Y4X0 333 aaPredicted RBP3.74□□□□□ -1.81
NXF1-205ENST00000527497 S4R3C0 116 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 TRIP11Q15643 1979 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 DSCAML1Q8TD84 2053 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 TICRRQ7Z2Z1 1910 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 KIDINS220Q9ULH0 1771 aa3.74□□□□□ -1.81
NXF1-205ENST00000527497 PREX2Q70Z35 1606 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 FANCAO15360 1455 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 KDM5CP41229 1560 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 SMG6Q86US8 1419 aaKnown RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 XIRP1Q702N8 1843 aaKnown RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 ATAD5Q96QE3 1844 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 A0A096LPI6 279 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 TRAV38-1A0A0B4J264 116 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 IGKV3D-20A0A0C4DH25 116 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 C7orf66A4D0T2 115 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 C17orf51A8MQB3 221 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 IFNGP01579 166 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 IGHV3-53P01767 116 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 RPS3P23396 243 aaKnown RBP eCLIP3.73□□□□□ -1.81
NXF1-205ENST00000527497 RBM11P57052 281 aaKnown RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 TMEM69Q5SWH9 247 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 ZNF322Q6U7Q0 402 aaPredicted RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 H1FXQ92522 213 aaKnown RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 ADAT3Q96EY9 351 aaPredicted RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 IL36BQ9NZH7 164 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 FUT9Q9Y231 359 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 CLTCQ00610 1675 aaKnown RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 NUP214P35658 2090 aaPredicted RBP3.73□□□□□ -1.81
NXF1-205ENST00000527497 STRCP1A6NGW2 1772 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 MED23Q9ULK4 1368 aa3.73□□□□□ -1.81
NXF1-205ENST00000527497 SCN10AQ9Y5Y9 1956 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 MED1Q15648 1581 aaPredicted RBP3.72□□□□□ -1.81
NXF1-205ENST00000527497 MROH2AA6NES4 1674 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 CNTLNQ9NXG0 1405 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 DOCK6Q96HP0 2047 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 IGKV1D-43A0A0B4J1Z2 117 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 DUXBA0A1W2PPF3 345 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 IGKV1-5P01602 117 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 CRHBPP24387 322 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 CD200P41217 278 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 TAS2R30P59541 319 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 RRAS2P62070 204 aaPredicted RBP3.72□□□□□ -1.81
NXF1-205ENST00000527497 RPS11P62280 158 aaKnown RBP eCLIP3.72□□□□□ -1.81
NXF1-205ENST00000527497 PSG9Q00887 426 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 AADACL3Q5VUY0 350 aa3.72□□□□□ -1.81
NXF1-205ENST00000527497 SDIM1Q6ZPB5 146 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms