RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NPPCP23582 126 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 CLDN12P56749 244 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 GNGT1P63211 74 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 OR1P1Q8NH06 330 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 A0A075B6Q4 140 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 EREGO14944 169 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 MT-CO2P00403 227 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 HPRT1P00492 218 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 CTXN2P0C2S0 81 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 HLA-DRB4P13762 266 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 FXYD7P58549 80 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 LINC00315P59091 139 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 DHRS2Q13268 280 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 RAB11BQ15907 218 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 C2orf76Q3KRA6 126 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 KCTD21Q4G0X4 260 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 HSD17B12Q53GQ0 312 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 DMBX1Q8NFW5 382 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 FAM3DQ96BQ1 224 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 MISP3Q96FF7 219 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 ZNF586Q9NXT0 402 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
NKX3-1-202ENST00000523261 EFCAB10A6NFE3 127 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 SULT1C2O00338 296 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 HBE1P02100 147 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 HIST1H1DP16402 221 aaKnown RBP9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 CRYBB3P26998 211 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 TALDO1P37837 337 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 CLINT1Q14677 625 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 OR10R2Q8NGX6 335 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 RNF141Q8WVD5 230 aa9.59□□□□□ -0.87
NKX3-1-202ENST00000523261 TMEM272A0A1B0GTI8 110 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 F5H768 121 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 UCHL1P09936 223 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 ERVFC1-1P60608 527 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 MS4A15Q8N5U1 240 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 MOB3AQ96BX8 217 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 CCL28Q9NRJ3 127 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 ELF5Q9UKW6 265 aaPredicted RBP9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 RAB22AQ9UL26 194 aa9.58□□□□□ -0.88
NKX3-1-202ENST00000523261 FAM90A26D6RGX4 464 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 DTYMKP23919 212 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 GADD45AP24522 165 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 WNT4P56705 351 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 ST3GAL4Q11206 333 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 RRN3P1Q2M238 152 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 CCDC197Q8NCU1 140 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 METTL26Q96S19 204 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 UPK3BQ9BT76 320 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 PLEKHA2Q9HB19 425 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 NSG2Q9Y328 171 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 AK6Q9Y3D8 172 aaKnown RBP9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 OR51B2Q9Y5P1 312 aa9.57□□□□□ -0.88
NKX3-1-202ENST00000523261 IGKV3-20P01619 116 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 PPP5CP53041 499 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 SNRPD3P62318 126 aaKnown RBP9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 MSMO1Q15800 293 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 TMEM69Q5SWH9 247 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 GDF5OSQ5U4N7 250 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 C1orf146Q5VVC0 180 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 SECTM1Q8WVN6 248 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 TMEM56Q96MV1 263 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 COMMD9Q9P000 198 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 GOLT1BQ9Y3E0 138 aa9.56□□□□□ -0.88
NKX3-1-202ENST00000523261 RNF213Q63HN8 5207 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 ERICH4A6NGS2 130 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 GCSHP23434 173 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 NPBWR1P48145 328 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 HOXA1P49639 335 aaPredicted RBP9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 EIF2B2P49770 351 aaKnown RBP9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 CATR1Q13166 79 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 CNIH2Q6PI25 160 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 DEFB104AQ8WTQ1 72 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 UHRF2Q96PU4 802 aa9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 SEPSECSQ9HD40 501 aaKnown RBP9.55□□□□□ -0.88
NKX3-1-202ENST00000523261 DBX1A6NMT0 343 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 MARCH11A6NNE9 402 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 LYRM9A8MSI8 78 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 MYL12BO14950 172 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 TMEM50AO95807 157 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 DNAH10OSP0CZ25 163 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 DEFB130BP0DP73 79 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 DEFB130AP0DP74 79 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 DEFB1P60022 68 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 ZNF114Q8NC26 417 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 ZBTB34Q8NCN2 500 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 GLMPQ8WWB7 406 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 NARS2Q96I59 477 aaKnown RBP9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 U3KQE9 123 aa9.54□□□□□ -0.88
NKX3-1-202ENST00000523261 AP2S1P53680 142 aaPredicted RBP9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 ERVK-16P61578 105 aa9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 C16orf54Q6UWD8 224 aa9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 OR51H1Q8NH63 302 aa9.53□□□□□ -0.88
NKX3-1-202ENST00000523261 PYDC1Q8WXC3 89 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms