RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CLPSP04118 112 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 PEAR1Q5VY43 1037 aaPredicted RBP13.56□□□□□ -0.24
USP42-207ENST00000521713 HIST1H2BLQ99880 126 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 NBL1P41271 181 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 RPL23P62829 140 aaKnown RBP13.56□□□□□ -0.24
USP42-207ENST00000521713 ICAM4Q14773 271 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 WDR82Q6UXN9 313 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 SRSF12Q8WXF0 261 aaKnown RBP13.56□□□□□ -0.24
USP42-207ENST00000521713 DERL1Q9BUN8 251 aa13.56□□□□□ -0.24
USP42-207ENST00000521713 CRYGSP22914 178 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 C2orf83Q53S99 150 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 ESPL1Q14674 2120 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 A0A1B0GWB2 263 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 TRGV3P03979 118 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 GNLYP22749 145 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 Q6AWC8 147 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 NRN1Q9NPD7 142 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 F11RQ9Y624 299 aaKnown RBP13.55□□□□□ -0.24
USP42-207ENST00000521713 SLC17A3O00476 420 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 GAS1P54826 345 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 VKORC1L1Q8N0U8 176 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 DDB2Q92466 427 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 MOSP00540 346 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 IGKV1D-33P01593 117 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 IGKV1-33P01594 117 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 LRTM2Q8N967 370 aa13.55□□□□□ -0.24
USP42-207ENST00000521713 TRAV9-2A0A087WT02 112 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 DLEU1O43261 78 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 PAPPA-AS1Q5QFB9 102 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 FBXL15Q9H469 300 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 ATP5LO75964 103 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 OR4X2Q8NGF9 303 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 REG4Q9BYZ8 158 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 NPIPB6E9PJ23 425 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 TNFSF13O75888 250 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
USP42-207ENST00000521713 IZUMO1RA6ND01 250 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 REG1AP05451 166 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 NPIPB3Q92617 1050 aa13.54□□□□□ -0.24
USP42-207ENST00000521713 YPEL1O60688 119 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 SERF1AO75920 110 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 IGHV1-46P01743 117 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 EFNA4P52798 201 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 HIST1H1AQ02539 215 aaPredicted RBP13.53□□□□□ -0.24
USP42-207ENST00000521713 CIRBPQ14011 172 aaKnown RBP13.53□□□□□ -0.24
USP42-207ENST00000521713 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
USP42-207ENST00000521713 YPEL2Q96QA6 119 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 MRPS16Q9Y3D3 137 aaKnown RBP13.53□□□□□ -0.24
USP42-207ENST00000521713 C7orf71A4D174 169 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 GPR183P32249 361 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 NPFFR1Q9GZQ6 430 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 PLAUP00749 431 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 OR10J3Q5JRS4 329 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 ROS1P08922 2347 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 DIDO1Q9BTC0 2240 aaKnown RBP13.53□□□□□ -0.24
USP42-207ENST00000521713 SYT8Q8NBV8 401 aa13.53□□□□□ -0.24
USP42-207ENST00000521713 TSPOP30536 169 aa13.52□□□□□ -0.24
USP42-207ENST00000521713 SRSF6Q13247 344 aaKnown RBP13.52□□□□□ -0.24
USP42-207ENST00000521713 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.24
USP42-207ENST00000521713 LYZL4Q96KX0 146 aa13.52□□□□□ -0.24
USP42-207ENST00000521713 TMEM133Q9H2Q1 129 aa13.52□□□□□ -0.24
USP42-207ENST00000521713 COL4A6Q14031 1691 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 ANOS1P23352 680 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 FOXG1P55316 489 aaPredicted RBP13.52□□□□□ -0.25
USP42-207ENST00000521713 SEC11AP67812 179 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 NR2C2APQ86WQ0 139 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 FGFBP3Q8TAT2 258 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 NABP1Q96AH0 204 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 MRPL16Q9NX20 251 aaKnown RBP13.52□□□□□ -0.25
USP42-207ENST00000521713 ATRXP46100 2492 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
USP42-207ENST00000521713 C1orf194Q5T5A4 169 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 PPP1R27Q86WC6 154 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 NEU1Q99519 415 aa13.52□□□□□ -0.25
USP42-207ENST00000521713 IGKV1-9A0A0C4DH69 117 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 A0A0G2JNJ9 132 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 CCL3L1P16619 93 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 ZCCHC24Q8N2G6 241 aaKnown RBP13.51□□□□□ -0.25
USP42-207ENST00000521713 SIGMAR1Q99720 223 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 Q9UFV3 132 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 CACNA1DQ01668 2161 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 CRXO43186 299 aaPredicted RBP13.51□□□□□ -0.25
USP42-207ENST00000521713 SNRPD3P62318 126 aaKnown RBP13.51□□□□□ -0.25
USP42-207ENST00000521713 SRSF3P84103 164 aaKnown RBP13.51□□□□□ -0.25
USP42-207ENST00000521713 ZNF525Q8N782 197 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 PLPPR1Q8TBJ4 325 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
USP42-207ENST00000521713 ARTNQ5T4W7 220 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 MRPL20Q9BYC9 149 aaKnown RBP13.51□□□□□ -0.25
USP42-207ENST00000521713 ZNF257Q9Y2Q1 563 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 TRBV6-7A0A0A0MS04 114 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 H7C2G1 150 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 ARPC1AQ92747 370 aa13.51□□□□□ -0.25
USP42-207ENST00000521713 TCF20Q9UGU0 1960 aaKnown RBP13.51□□□□□ -0.25
USP42-207ENST00000521713 DOCK8Q8NF50 2099 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms