RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SCGB1D2O95969 90 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 HLA-DRB1P01911 266 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 SEC11BP0C7V7 166 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 CAV2P51636 162 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 SERF2P84101 59 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 EWSR1Q01844 656 aaKnown RBP eCLIP5.99□□□□□ -1.45
SDCBP-206ENST00000519115 C5orf64Q2M2E5 130 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 VWC2Q2TAL6 325 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 OR2B11Q5JQS5 317 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 C5orf56Q8N8D9 126 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 OR10P1Q8NGE3 313 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 OR1S2Q8NGQ3 325 aa5.99□□□□□ -1.45
SDCBP-206ENST00000519115 RNASEH2CQ8TDP1 164 aaKnown RBP5.99□□□□□ -1.45
SDCBP-206ENST00000519115 GNPNAT1Q96EK6 184 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-206ENST00000519115 ZNF430Q9H8G1 570 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-206ENST00000519115 HEYLQ9NQ87 328 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-206ENST00000519115 PAIP2BQ9ULR5 123 aaKnown RBP5.99□□□□□ -1.45
SDCBP-206ENST00000519115 MGAM2Q2M2H8 2515 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 NBEAL1Q6ZS30 2694 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 PMS2P5A8MQ11 134 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 CORTO00230 105 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 CYB5BO43169 146 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 WIPF1O43516 503 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 IFNA5P01569 189 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 CNTFRP26992 372 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 SNCAP37840 140 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 CRIP2P52943 208 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-206ENST00000519115 OR2B8PP59922 312 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 IFITM2Q01629 132 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 MMDQ15546 238 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 MRGPRG-AS1Q2M3A8 158 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 ETFRF1Q6IPR1 90 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 C10orf99Q6UWK7 81 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 SSX9Q7RTT3 188 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 VKORC1L1Q8N0U8 176 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 SCARB1Q8WTV0 552 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 SAT2Q96F10 170 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-206ENST00000519115 ATP6V0BQ99437 205 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 GINS3Q9BRX5 216 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 MAGT1Q9H0U3 335 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 SLC25A32Q9H2D1 315 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 PLEKHA3Q9HB20 300 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 ZC4H2Q9NQZ6 224 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 MED9Q9NWA0 146 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 METTL1Q9UBP6 276 aaKnown RBP5.98□□□□□ -1.45
SDCBP-206ENST00000519115 UBQLN2Q9UHD9 624 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 TNCP24821 2201 aa5.98□□□□□ -1.45
SDCBP-206ENST00000519115 VWFP04275 2813 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 PKD1L1Q8TDX9 2849 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 TRAV3A0A0B4J244 114 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 FAM24AA6NFZ4 105 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 MSGN1A6NI15 193 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 NUDT19A8MXV4 375 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 SLC25A17O43808 307 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 FBXO24O75426 580 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 TSPAN15O95858 294 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 CRYGCP07315 174 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 CD28P10747 220 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 RPL27AP46776 148 aaKnown RBP5.97□□□□□ -1.45
SDCBP-206ENST00000519115 RAB14P61106 215 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 DLK1P80370 383 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 NHLH2Q02577 135 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 EXOSC2Q13868 293 aaKnown RBP5.97□□□□□ -1.45
SDCBP-206ENST00000519115 IZUMO4Q1ZYL8 232 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 AKIRIN2Q53H80 203 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 SPANXN5Q5MJ07 72 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 DPPA3Q6W0C5 159 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 Q8N9W7 124 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 OR5C1Q8NGR4 320 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 OR1P1Q8NH06 330 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 SGMS2Q8NHU3 365 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 RNF141Q8WVD5 230 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 ST8SIA2Q92186 375 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 RITA1Q96K30 269 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 NOL4LQ96MY1 436 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-206ENST00000519115 ATP5SQ99766 215 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 PSMG3Q9BT73 122 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-206ENST00000519115 ZNF471Q9BX82 626 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-206ENST00000519115 WNT10AQ9GZT5 417 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 NPVFQ9HCQ7 196 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 LINC00527Q9UJ94 153 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 TIMM9Q9Y5J7 89 aa5.97□□□□□ -1.45
SDCBP-206ENST00000519115 A0A1W2PRX2 142 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 IGSF23A1L1A6 192 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 LINC01548A6NM66 108 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 C15orf62A8K5M9 175 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 NPIPB5A8MRT5 1133 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 PRSS46E5RG02 174 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 M0QZ24 198 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 IFNA10P01566 189 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 MBP02144 154 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 SPP1P10451 314 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 NPY1RP25929 384 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 TMEM267Q0VDI3 215 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-206ENST00000519115 RAB31Q13636 194 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 PMS2P11Q13670 270 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 NSUN5P1Q3KNT7 163 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 CLLU1Q5K131 121 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 SLC35E3Q7Z769 313 aa5.96□□□□□ -1.46
SDCBP-206ENST00000519115 ZNF329Q86UD4 541 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms