RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ELLP55199 621 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 TMEM268Q5VZI3 342 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 LCN12Q6JVE5 192 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 SPSB3Q6PJ21 355 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 OR52E5Q8NH55 327 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 BSCL2Q96G97 398 aaPredicted RBP12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 ZNF414Q96IQ9 312 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 SRRQ9GZT4 340 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 HUWE1Q7Z6Z7 4374 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 MT-CO2P00403 227 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 FRMD6-AS1P0C7T7 363 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 AKR1C4P17516 323 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 SNCAP37840 140 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 MFAP4P55083 255 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 AP3S2P59780 193 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 SPCS3P61009 180 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 BAK1Q16611 211 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 SPANXN2Q5MJ10 180 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 DEDD2Q8WXF8 326 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 CACNG8Q8WXS5 425 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 IL22RA2Q969J5 263 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 MISP3Q96FF7 219 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 TXN2Q99757 166 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 PALMDQ9NP74 551 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 PRR13Q9NZ81 148 aa12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
PDLIM5-216ENST00000511767 IGHV3-48P01763 117 aa12.16□□□□□ -0.46
PDLIM5-216ENST00000511767 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-216ENST00000511767 FAUP35544 74 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-216ENST00000511767 MLANAQ16655 118 aa12.16□□□□□ -0.46
PDLIM5-216ENST00000511767 SDHCQ99643 169 aaPredicted RBP12.16□□□□□ -0.46
PDLIM5-216ENST00000511767 MLXQ9UH92 298 aa12.16□□□□□ -0.46
PDLIM5-216ENST00000511767 K7EMT4 169 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 NDUFA4O00483 81 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 IGHV4-30-4P0DP06 118 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 SUB1P53999 127 aaKnown RBP eCLIP12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 Q56UQ5 140 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 LYZL2Q7Z4W2 148 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 RNASE11Q8TAA1 199 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 DYNLRB2Q8TF09 96 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 MARC2Q969Z3 335 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 SLC25A21Q9BQT8 299 aaPredicted RBP12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 PDCD10Q9BUL8 212 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 GAR1Q9NY12 217 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 CACNG5Q9UF02 275 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 UFC1Q9Y3C8 167 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 SELENOKQ9Y6D0 94 aa12.15□□□□□ -0.46
PDLIM5-216ENST00000511767 A0A0B4J2A0 478 aa12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 BSXQ3C1V8 233 aa12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 TMEM128Q5BJH2 165 aa12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 ZNF57Q68EA5 555 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 UBAC2Q8NBM4 344 aa12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 TMEM190Q8WZ59 177 aa12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 SHPKQ9UHJ6 478 aa12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 U3KQK5 164 aa12.14□□□□□ -0.47
PDLIM5-216ENST00000511767 TMEM50AO95807 157 aa12.13□□□□□ -0.47
PDLIM5-216ENST00000511767 NMSQ5H8A3 153 aa12.13□□□□□ -0.47
PDLIM5-216ENST00000511767 TMEM61Q8N0U2 210 aa12.13□□□□□ -0.47
PDLIM5-216ENST00000511767 WDR89Q96FK6 387 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-216ENST00000511767 ENY2Q9NPA8 101 aa12.13□□□□□ -0.47
PDLIM5-216ENST00000511767 TENM3Q9P273 2699 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 TRAV25A0A0B4J276 109 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 NUPL2O15504 423 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 CD7P09564 240 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 SULT1A3P0DMM9 295 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 SULT1A4P0DMN0 295 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 GUCA2BQ16661 112 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 LINC00322Q6ZN03 302 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 TMED4Q7Z7H5 227 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 GTSCR1Q86UQ5 136 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 LGI3Q8N145 548 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 DUSP18Q8NEJ0 188 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 NEURL2Q9BR09 285 aa12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
PDLIM5-216ENST00000511767 NBEAL2Q6ZNJ1 2754 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 STAB2Q8WWQ8 2551 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 C15orf62A8K5M9 175 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 ANXA3P12429 323 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 HTR2BP41595 481 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 NPBWR1P48145 328 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 HOXA1P49639 335 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 CCR6P51684 374 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 LRTM2Q8N967 370 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 C20orf24Q9BUV8 137 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 MRPL36Q9P0J6 103 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 CACFD1Q9UGQ2 172 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 SMPXQ9UHP9 88 aa12.11□□□□□ -0.47
PDLIM5-216ENST00000511767 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 NAP1L6A6NFF2 107 aa12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 CORTO00230 105 aa12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 GNG7O60262 68 aa12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 CD81P60033 236 aa12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 SRPXP78539 464 aa12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 RELQ04864 619 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-216ENST00000511767 ANKRD55Q3KP44 614 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms