RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 IFNA21P01568 189 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGKV1-39P01597 117 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGKV1D-39P04432 117 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 P0C879 139 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 ANXA7P20073 488 aaKnown RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 CNTFRP26992 372 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 G6PCP35575 357 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 RPL27AP46776 148 aaKnown RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 FXYD3Q14802 87 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 SP6Q3SY56 376 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 AARDQ4LEZ3 155 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 C9orf152Q5JTZ5 239 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 SSX9Q7RTT3 188 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 STPG2Q8N412 459 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR5M8Q8NGP6 311 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR1L6Q8NGR2 347 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR1L8Q8NGR8 309 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR52E5Q8NH55 327 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 LINC01006Q8NI28 216 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 RNASE11Q8TAA1 199 aaKnown RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF431Q8TF32 576 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 SCARB1Q8WTV0 552 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 ARPC1AQ92747 370 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 PDCD10Q9BUL8 212 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF430Q9H8G1 570 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM14BQ9NUH8 114 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 FLVCR2Q9UPI3 526 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 FOXA2Q9Y261 457 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 STAB1Q9NY15 2570 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 TET2Q6N021 2002 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 TRAV41A0A0B4J266 112 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 A0A1W2PN81 502 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 PSMB11A5LHX3 300 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 PRSS47A8MTI9 375 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 FAM90A26D6RGX4 464 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 INS-IGF2F8WCM5 200 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 FCN1O00602 326 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 MED6O75586 246 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGKV1-5P01602 117 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGHG4P01861 327 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 HOXB5P09067 269 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 SULT1A3P0DMM9 295 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 SULT1A4P0DMN0 295 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 CHRNA7P36544 502 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 ATP5IP56385 69 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 SPCS3P61009 180 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 HSPE1P61604 102 aaKnown RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 SMCO1Q147U7 214 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 OXA1LQ15070 435 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 TNXAQ16473 311 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 MRGPRG-AS1Q2M3A8 158 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 KLK9Q2XQG4 91 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 KRTAP24-1Q3LI83 254 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 PDLIM3Q53GG5 364 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 NMSQ5H8A3 153 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 C10orf25Q5T742 122 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 CENPVQ7Z7K6 275 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 VKORC1L1Q8N0U8 176 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 C12orf45Q8N5I9 185 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 TTC9CQ8N5M4 171 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 SLC35G3Q8N808 338 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR4X2Q8NGF9 303 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 LHFPL5Q8TAF8 219 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 CASTOR1Q8WTX7 329 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 SRSF12Q8WXF0 261 aaKnown RBP4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 HSPB9Q9BQS6 159 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 C19orf24Q9BVV8 132 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 AAMDCQ9H7C9 122 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 PARP11Q9NR21 331 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 NDUFA4L2Q9NRX3 87 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZFP57Q9NU63 452 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 MSRB1Q9NZV6 116 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 KLK9Q9UKQ9 250 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR51B2Q9Y5P1 312 aa4.29□□□□□ -1.72
HMGB1P44-201ENST00000508597 A0A0B4J293 547 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 TEX50A0A1B0GTY4 177 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 C7orf66A4D0T2 115 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 MSGN1A6NI15 193 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 ATP6V0E1O15342 81 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 OPN1MWP04001 364 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 CRYGCP07315 174 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR9G9P0C7N8 305 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 TRAPPC2P0DI81 140 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 TRAPPC2BP0DI82 140 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 OPN1MW2P0DN77 364 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 OPN1MW3P0DN78 364 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 HIST1H1BP16401 226 aaKnown RBP4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 MDKP21741 143 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 ARL3P36405 182 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR2B8PP59922 312 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 GNB1P62873 340 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 ERHP84090 104 aaKnown RBP4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 CYCSP99999 105 aaKnown RBP4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 PRCDQ00LT1 54 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 PJVKQ0ZLH3 352 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms