RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 SNCAP37840 140 aa9.99□□□□□ -0.81
TCOF1-209ENST00000506630 LGI3Q8N145 548 aa9.99□□□□□ -0.81
TCOF1-209ENST00000506630 UBAC2Q8NBM4 344 aa9.99□□□□□ -0.81
TCOF1-209ENST00000506630 C7orf50Q9BRJ6 194 aaKnown RBP9.99□□□□□ -0.81
TCOF1-209ENST00000506630 SHPKQ9UHJ6 478 aa9.99□□□□□ -0.81
TCOF1-209ENST00000506630 HUWE1Q7Z6Z7 4374 aaKnown RBP9.98□□□□□ -0.81
TCOF1-209ENST00000506630 OR2T8A6NH00 312 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 K7EIM0 57 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 TGOLN2O43493 480 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 NDUFB6O95139 128 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 CSN3P07498 182 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 SULT1A3P0DMM9 295 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 SULT1A4P0DMN0 295 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 SPCS3P61009 180 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 PPP1R1AQ13522 171 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 Q56UQ5 140 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 PLET1Q6UQ28 207 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 IL34Q6ZMJ4 242 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 LYZL2Q7Z4W2 148 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 SCARB1Q8WTV0 552 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 PINX1Q96BK5 328 aaKnown RBP9.98□□□□□ -0.81
TCOF1-209ENST00000506630 C21orf62Q9NYP8 219 aa9.98□□□□□ -0.81
TCOF1-209ENST00000506630 PIGBOS1A0A0B4J2F0 54 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 IGHV3-35A0A0C4DH35 117 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 CEBPZOSA8MTT3 80 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 INS-IGF2F8WCM5 200 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 SFT2D2O95562 160 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 MT-CO2P00403 227 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 BTCP35070 178 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 ANKRD55Q3KP44 614 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 FAM106AQ4KMX7 169 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 NMSQ5H8A3 153 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 LINC00299Q6ZSB3 139 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 GPHB5Q86YW7 130 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 OR52E5Q8NH55 327 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 MUC7Q8TAX7 377 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 S100ZQ8WXG8 99 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 BSCL2Q96G97 398 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-209ENST00000506630 CCDC32Q9BV29 185 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 PTTG2Q9NZH5 202 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 FLVCR2Q9UPI3 526 aa9.97□□□□□ -0.81
TCOF1-209ENST00000506630 LSM4Q9Y4Z0 139 aaKnown RBP9.97□□□□□ -0.81
TCOF1-209ENST00000506630 DUXBA0A1W2PPF3 345 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 ZNF320A2RRD8 509 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 C2orf70A6NJV1 201 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 I3L2K1 104 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 LGALS9O00182 355 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 LYRM1O43325 122 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 IGHV3-48P01763 117 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 RNASE2P10153 161 aaKnown RBP9.96□□□□□ -0.82
TCOF1-209ENST00000506630 GP9P14770 177 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 EDN2P20800 178 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 SUB1P53999 127 aaKnown RBP eCLIP9.96□□□□□ -0.82
TCOF1-209ENST00000506630 UBE2MP61081 183 aaKnown RBP9.96□□□□□ -0.82
TCOF1-209ENST00000506630 SMCO1Q147U7 214 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 OR1S1Q8NH92 325 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 DYNLRB2Q8TF09 96 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 ASCL2Q99929 193 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 HEYLQ9NQ87 328 aaPredicted RBP9.96□□□□□ -0.82
TCOF1-209ENST00000506630 BATF3Q9NR55 127 aa9.96□□□□□ -0.82
TCOF1-209ENST00000506630 F8W735 103 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-209ENST00000506630 CORTO00230 105 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 PLA2G10O15496 165 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 MFAP4P55083 255 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 SPSB3Q6PJ21 355 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 UNQ9165/PRO28630Q6UXU0 137 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 CACNG8Q8WXS5 425 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 ATP6V0BQ99437 205 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 CHRDL1Q9BU40 450 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 GAR1Q9NY12 217 aaKnown RBP9.95□□□□□ -0.82
TCOF1-209ENST00000506630 SIGLEC8Q9NYZ4 499 aa9.95□□□□□ -0.82
TCOF1-209ENST00000506630 A0A1B0GU03 582 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 C9orf170A2RU37 121 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 A8MWP6 167 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 GNG7O60262 68 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 HOXB5P09067 269 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 OR4E1P0C645 316 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 FOLR2P14207 255 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 ANXA7P20073 488 aaKnown RBP9.94□□□□□ -0.82
TCOF1-209ENST00000506630 OPRK1P41145 380 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 HTR2BP41595 481 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 C4orf46Q504U0 113 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 LCN12Q6JVE5 192 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 SLC24A4Q8NFF2 622 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 ZNF436Q9C0F3 470 aaPredicted RBP9.94□□□□□ -0.82
TCOF1-209ENST00000506630 WDR12Q9GZL7 423 aaKnown RBP9.94□□□□□ -0.82
TCOF1-209ENST00000506630 C20orf85Q9H1P6 137 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 HIPK2Q9H2X6 1198 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 PALMDQ9NP74 551 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 CACFD1Q9UGQ2 172 aa9.94□□□□□ -0.82
TCOF1-209ENST00000506630 TMEM213A2RRL7 107 aa9.93□□□□□ -0.82
TCOF1-209ENST00000506630 NUPL2O15504 423 aaKnown RBP9.93□□□□□ -0.82
TCOF1-209ENST00000506630 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-209ENST00000506630 TNFRSF9Q07011 255 aa9.93□□□□□ -0.82
TCOF1-209ENST00000506630 DHRS2Q13268 280 aa9.93□□□□□ -0.82
TCOF1-209ENST00000506630 ZNF846Q147U1 533 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms